Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., membrane fusion protein of a type I secretion system from Klebsiella michiganensis M5al

 Score = 52.0 bits (123), Expect = 4e-11
 Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 35/230 (15%)

Query: 72  EIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQVQKGQQLILLDDTRFRSDFRE 131
           +I+KV +  G + P+ QV V   + G L +++ VR+GE+V+KGQ L  +D T   SD R 
Sbjct: 48  DIEKVVLASGIIKPAVQVSVGAQVSGQL-RKLYVRQGERVRKGQLLAEIDPTLQLSDLRN 106

Query: 132 REQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVER 191
              Q+A+  A  L   A++                   + Y K         ++   + R
Sbjct: 107 ATAQLASARAQKLASEATL-------------------VQYRKAL-------ARERAMNR 140

Query: 192 QRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANE 251
                  DL+  + Q +   QQI   +  +++AE  +     +  Y +    I  P+  E
Sbjct: 141 DGSGVSSDLEQAQAQYAAQVQQIAVNEAQIVQAEMSVQTANANLGYTR----ILAPMDGE 196

Query: 252 --GVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVREAMLSRINAAQ 299
             G+V +     +  Q+  T   L   +L    +++ + EA + +I+  Q
Sbjct: 197 VLGIVTREGQTIVSSQIAPT--ILVLADLDKMQVQTRISEADIQKIHPGQ 244