Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., secretion protein HlyD from Klebsiella michiganensis M5al

 Score =  222 bits (565), Expect = 2e-62
 Identities = 155/437 (35%), Positives = 230/437 (52%), Gaps = 69/437 (15%)

Query: 49  SARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREG 108
           S R+IL + V   +  + WA +A +D+V+ G GKV+PSS+ QVIQ L+GG++ ++ VREG
Sbjct: 29  SRRLILLLAVMLLVGGV-WAWFAVLDEVSTGTGKVIPSSREQVIQTLDGGILTELNVREG 87

Query: 109 EQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSV 168
            +VQ GQ +  LD TR  S+  E + +     A+ ++L+A +++                
Sbjct: 88  SKVQAGQVVARLDPTRSESNVGESQAKYRASLAASIRLTAEVNN---------------- 131

Query: 169 QLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARI 228
                 LAFP  L  + P L+  +   Y     + + QLS  ++Q               
Sbjct: 132 ----QPLAFPDSLK-AWPALLAEETRLYH----SRKEQLSKSTRQ--------------- 167

Query: 229 INLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVR 288
             L +S      EL ITE LA  G    +E+L+L++Q+ D                    
Sbjct: 168 --LDESLKLVNSELAITERLAKTGAASNVEVLRLRQQVADIS------------------ 207

Query: 289 EAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYV 348
                +I+   ++  + +++L++A   ++SL E   G  D V R  V SPV G VK + V
Sbjct: 208 ---FKKIDLNTRYFVDAREQLSKANADVASLAEVIKGRADSVTRLTVRSPVQGIVKNIKV 264

Query: 349 NTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEG 408
           NT+GGVI P   ++EIVP +  LL+EA+I+P+DI F+ PD  A+VK +AYD+  YG L G
Sbjct: 265 NTIGGVIAPNGELMEIVPVDGRLLIEARISPRDIAFIHPDQQALVKITAYDYAIYGALNG 324

Query: 409 TLEHISADTTQDEEGNSFYLVRV--RTKETTLGH--DQNLPIIPGMTASVDIITGKRTVL 464
            +E IS DTTQDE     Y  RV  RT    L +   +   I PGM A+VDI TG++TV+
Sbjct: 325 VVETISPDTTQDEAKPDIYYYRVFIRTDYDYLENKSGKRFLIGPGMIATVDIKTGEKTVM 384

Query: 465 DYLLKPILSAQSNALRE 481
           DYL+KP   A+  ALRE
Sbjct: 385 DYLVKPFNRAK-EALRE 400