Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  242 bits (617), Expect = 2e-68
 Identities = 150/431 (34%), Positives = 235/431 (54%), Gaps = 24/431 (5%)

Query: 53  ILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQVQ 112
           IL +++A   + + WA WA I++V+   G+VVPS   + ++ LEGG+V +ILV EG++V 
Sbjct: 30  ILLLIMALAGVGLVWAGWATIEEVSRADGRVVPSGSARGVETLEGGIVAEILVAEGDRVD 89

Query: 113 KGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQLDY 172
            GQ+L+ +DDT   +D  E   + A L A  L+L A +                    D 
Sbjct: 90  AGQELVRIDDTGASADLGELAARRAALRARALRLEAELG-------------------DA 130

Query: 173 SKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARIINLR 232
           + + F P    +   L  R+R  +     +  +Q +VL  Q+ Q++Q++ E    +    
Sbjct: 131 AAVDFAPAGLAADDPLALRERALFDSRRASYVSQRAVLEAQVLQRRQEITELTNGLARSD 190

Query: 233 QSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVREAML 292
           +S     +E+ I E   N GV+P+ +++ ++R+    R E    + +    ++A+ EA  
Sbjct: 191 ESLALLDEEIAIRE---NSGVIPRAQIIPVERERTGMRSERDRLDSRRAQAEAALMEAEA 247

Query: 293 SRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVNTVG 352
                    R E   + +Q  + L+ + ES    ED V R  + +PVTG V  L V++ G
Sbjct: 248 RLTELDLLRRAEINAERSQTLNDLAIILESIRRAEDVVTRAALRAPVTGVVSALNVSSQG 307

Query: 353 GVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGTLEH 412
            V+ PG  ++ IVP    L +EA++ P+DI F+RP LPA VK +A+DFT YG L G +  
Sbjct: 308 EVVTPGEEVLRIVPEGTGLEIEARLRPEDIAFVRPGLPAKVKITAFDFTIYGALPGHVVR 367

Query: 413 ISADTTQDEE-GNSFYLVRVRTKETTLGHDQN-LPIIPGMTASVDIITGKRTVLDYLLKP 470
           + AD  QD+  G +F+ + ++T+ET L   Q  L I PGM ASVDI+TG+RTVLDYLLKP
Sbjct: 368 VGADAEQDDSTGETFFPIIIQTEETQLTRGQEVLEIRPGMVASVDILTGERTVLDYLLKP 427

Query: 471 ILSAQSNALRE 481
              A++ ALRE
Sbjct: 428 FRKARAEALRE 438