Pairwise Alignments

Query, 246 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1430 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 41.6 bits (96), Expect = 9e-08
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 4/113 (3%)

Query: 11  SLFKQLPGYWGCKDLNSVFVYANQAYGELIGLKRAEDCIGRTDFEMPSPTAACAAEFQQQ 70
           SL + +P     KD   +++  N  +  L G + AE  +GRTD++        A  F+  
Sbjct: 289 SLIQGMPDLVWLKDPAGIYLACNSRFESLFGHREAE-IVGRTDYDFVG--RELADFFRDN 345

Query: 71  DRYVIETGHSVKVLDIHPYP-DGHWHAHIFTKTPWRDSQGKIQGTIFFGQDLT 122
           DR  +  GH+ +  +   +  DGH       KTP  D  G + G +   +D+T
Sbjct: 346 DRRAMALGHASRNEEWLVFAADGHRELVETIKTPIYDRDGVVLGVLGVARDIT 398