Pairwise Alignments

Query, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score = 99.0 bits (245), Expect = 9e-26
 Identities = 75/246 (30%), Positives = 118/246 (47%), Gaps = 24/246 (9%)

Query: 47  HDHSYTQIVIGLKGQAEFEVRGMGNIVGPGQGCVVTSGSDHAFGGVVGQSDILVLNMPVP 106
           H H + Q+V GL G  +FEV G G+ V      VV +G+ HA G   G S  LVL+  VP
Sbjct: 17  HSHDHAQLVFGLSGALDFEVEGRGSQVVQQSFVVVPAGAHHACGSPHG-SRCLVLD--VP 73

Query: 107 SDDDPLLLRKLNELAVGDVYFQLDGQIQRLI----QMLVQEMQASPDDLLLGRACNDTVV 162
           SDD            VG          +RL+    ++ +   Q+     L G   +D V+
Sbjct: 74  SDD-----------WVGQCLGDHADASRRLLDDTARLPLDAGQSQLVSWLAGSPVDDPVI 122

Query: 163 A------LLQRHISALASVHKESRFDMEVVDRYIEQHLAHRISVAQLAGSVFLSESQFHV 216
           A      LL    +A  + H   R     ++ +I+Q+ A+ + VA LA    LS ++ H 
Sbjct: 123 AQQGAVLLLASLNNARQATHGGRRLPYAALNAHIDQNAAYALQVADLARIAGLSNARLHA 182

Query: 217 LFKEQMGLTPHQYVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQSTFTHTFSRLHGISP 276
            F  + G TP  Y+ ++R+  A  L+   +L +G++A   G+S+QS F+    R  G+SP
Sbjct: 183 RFVAECGQTPMDYIRSRRLHKAVALLRDSQLPIGEIAHRVGYSSQSAFSAAVLREFGVSP 242

Query: 277 SQYKRR 282
            + +R+
Sbjct: 243 GKLRRQ 248