Pairwise Alignments

Query, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  139 bits (350), Expect = 6e-38
 Identities = 88/244 (36%), Positives = 130/244 (53%), Gaps = 6/244 (2%)

Query: 35  AELITLPSHMACHDHSYTQIVIGLKGQAEFEVRGMGNIVGPGQGCVVTSGSDHAFGGVVG 94
           A L+ L      H H Y Q+V+ L G+AEFEV G G  V   + C+V   +DH F G+ G
Sbjct: 4   ARLLRLDDQTHQHAHDYHQLVMSLSGRAEFEVNGTGGEVCRMRACLVPGDADHGFAGM-G 62

Query: 95  QSDILVLNMPVPS--DDDPLLLRKLNELAVGDVYFQLDGQIQRLIQMLVQEMQASPDDLL 152
            + +L++++       +DP LL +L E      Y  LD   Q L+     E+     D L
Sbjct: 63  DNRMLIIDLDEQDVGTEDPELLARLFE---APRYPALDADFQNLLAYAGAELARYGSDPL 119

Query: 153 LGRACNDTVVALLQRHISALASVHKESRFDMEVVDRYIEQHLAHRISVAQLAGSVFLSES 212
           L RA    ++  L   +   +        D++ +D +I+ +LA RI+VA+LA  V LS S
Sbjct: 120 LARALGGVLLRALHLRLFGESLQRPVGPLDIQRLDSHIQDNLARRITVAELAQVVCLSPS 179

Query: 213 QFHVLFKEQMGLTPHQYVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQSTFTHTFSRLH 272
            FH  FK+ +GLTPHQY+L  R+D A +L+ +  L L ++AE  GFS+QS  T    R  
Sbjct: 180 HFHAQFKDCVGLTPHQYLLKTRLDRAARLLRETPLPLVRIAEECGFSSQSALTTATRRYL 239

Query: 273 GISP 276
           G++P
Sbjct: 240 GLTP 243