Pairwise Alignments

Query, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 66.2 bits (160), Expect = 8e-16
 Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 16/196 (8%)

Query: 97  DILVLNMPVP-SDDDPLLLRKLNELAVGDVYFQLDGQ-IQRLIQMLVQEMQASPDDLLLG 154
           D+  LN  +P  D+   + + LNE  +   +    G+ I+  I  L+Q +Q+  +   LG
Sbjct: 98  DLAQLNRLIPVMDNHHRVPQALNESRLPGYFIAPTGEAIECSIHRLLQALQSPLEAEALG 157

Query: 155 RACNDTVVALLQRHIS--------ALASVHKE-SRFDMEVVDRYIEQHLAHRISVAQLAG 205
            A    V+ +L R ++        ALA  H   SR D  +   Y+ +H A  I V QLA 
Sbjct: 158 EAM---VLEILYRLLALPNAAPLYALALSHTRLSRIDKAL--SYLHKHYAASIEVDQLAA 212

Query: 206 SVFLSESQFHVLFKEQMGLTPHQYVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQSTFT 265
            V +S S FH  FKE    +P QY+   R++ AK+L+++  + + Q A   G+ + + F+
Sbjct: 213 LVNMSPSAFHRCFKEVTASSPIQYLKKVRLNKAKELLQRPGVKVKQAAIEVGYESPAQFS 272

Query: 266 HTFSRLHGISPSQYKR 281
             F R    SP +  R
Sbjct: 273 REFKRYFSHSPGECAR 288