Pairwise Alignments

Query, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., AraC-type DNA-binding domain-containing protein from Marinobacter adhaerens HP15

 Score =  114 bits (285), Expect = 2e-30
 Identities = 73/249 (29%), Positives = 131/249 (52%), Gaps = 6/249 (2%)

Query: 35  AELITLPSHMACHDHSYTQIVIGLKGQAEFEVRGMGNIVGPGQGCVVTSGSDHAFGGVVG 94
           A+L+ LP     H H + QIVIG++G+AE  V G G  +   +  +V + + H + G   
Sbjct: 4   AKLLKLPMAAHQHRHEHHQIVIGVRGEAELSVDGAGAQLDTWRAYLVPTEARHDYRGN-D 62

Query: 95  QSDILVLNMP--VPSDDDPLLLRKLNELAVGDV--YFQLDGQIQRLIQMLVQEMQASPDD 150
           ++ +LV+N+    P+ + P        + V +     Q+D ++  L+Q    E   +PD 
Sbjct: 63  KNHVLVINLDPLTPAVNSPAHADYERMMRVFEKPRTLQMDSRLHGLVQFAAGEFDRAPDH 122

Query: 151 LLLGRACNDTVVALLQRHISALASVHKE-SRFDMEVVDRYIEQHLAHRISVAQLAGSVFL 209
           + L +    +++  +   I+   S     +    E V RYI ++L  +I+V  +AG   L
Sbjct: 123 ITLQQHLASSILYCMADRITEGRSFSSNRNAISPEAVRRYILKNLHKKITVEDMAGEACL 182

Query: 210 SESQFHVLFKEQMGLTPHQYVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQSTFTHTFS 269
           S S+FH +F+E  G+TPHQ++L  R++ A  L+ +  L + +++  TGFS+QS  T+   
Sbjct: 183 SVSRFHEVFRELAGITPHQFLLQTRLEQAATLLSKTTLTVSEISYRTGFSSQSALTNALR 242

Query: 270 RLHGISPSQ 278
           +  G +PS+
Sbjct: 243 KYKGTTPSR 251