Pairwise Alignments

Query, 496 a.a., sodium/proline symporter PutP from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., sodium/proline symporter (RefSeq) from Shewanella loihica PV-4

 Score =  401 bits (1031), Expect = e-116
 Identities = 224/503 (44%), Positives = 319/503 (63%), Gaps = 38/503 (7%)

Query: 13  VYLILMLAIGVYAYQR-TKNSADYFLGGRSLGPWPAALSAGASDMSGWLLLGLPGYAYAA 71
           +Y + MLAIG++AY+R T + + Y LGGR + P   ALSAGASDMSGW+L+GLPG  +  
Sbjct: 11  IYFLAMLAIGLFAYRRSTDDVSGYILGGRQVSPQVTALSAGASDMSGWMLMGLPGAMFLV 70

Query: 72  GIESFWLAGGLLVGTWANWLVNAKRLRTYS-ITTDSLTLPEFLSRRFNDNSKLIQTISAF 130
           G E+ ++A GLL+G   N+L+ A +LR Y+ +  ++LT+PEF ++RF+D S  ++ ISA 
Sbjct: 71  GFETIYIALGLLLGALVNYLIVAPKLRVYTEVANNALTIPEFFAKRFHDPSCNVRIISAA 130

Query: 131 FILLFFLFYTSSGLVAGGKLFETVFGLDYSTAVIIGTVCVVSYTLFGGFLAVSWTDLVQG 190
            I++FF  YTS+GLVAGGKLFE+ F ++Y   ++I    VVSYTL GGFLAVS TD VQG
Sbjct: 131 IIVIFFTLYTSAGLVAGGKLFESAFEVNYELGLVITLGVVVSYTLLGGFLAVSLTDFVQG 190

Query: 191 LLMAAALMIVPIAA----------MNGGFTQLNHDLAAINPELLTLWNDAKGEPLSAIAI 240
            +M  AL++VP+ A          MN  +  + H   A+             + ++ + +
Sbjct: 191 CIMFVALILVPVVAYQEFSNADKMMNFAYESIPHFGEAM-------------QNVTLLGL 237

Query: 241 ISLVAWGLGYFGQPHILARFKASRSNKDLITARRIAVVWTGLSMAGAILVGLTGLIFVTQ 300
           IS ++WGLGYFGQPHI+ RF A RS  D+ TA+ I + W  +++ GA+  GL G+ +  +
Sbjct: 238 ISALSWGLGYFGQPHIIVRFMAIRSVSDIKTAKNIGMSWMTVTIIGALATGLVGIAYANK 297

Query: 301 SGTIGLDDGEKIFMLLVNSLFHPVIAGILLAAILAAIMSTADSQLLVSSSALAEDFYKQV 360
              + L D E IF++    LFHP+I+G LLAAILAAIMST  SQLLVSSS+L ED Y+ V
Sbjct: 298 FD-MKLSDPETIFIVFSELLFHPLISGFLLAAILAAIMSTISSQLLVSSSSLTEDIYRVV 356

Query: 361 FKTDASSEDIVRVGRIAVILISLIALFLAMTPDSSVLGLVSYAWAGFGAAFGPALVLSLY 420
            K +AS E++V++GR  V  ++++A  LA+   +S+L LVS AWAGFGAAFGP ++ SLY
Sbjct: 357 SKKEASEEEMVKLGRFGVAGVAIVASLLALDRSNSILSLVSNAWAGFGAAFGPLVLFSLY 416

Query: 421 WPRMNRHGALSGIIVGGVTIVVW---------KQLSGGWFDVYEIVPGIILSTLSIVVVS 471
              +    A++GI+ G  T++ W         K LS     +YE++PG + S+L I  VS
Sbjct: 417 KKNLTHKAAVAGIVAGAATVLFWIYAPVLPEGKALSS---MLYEMIPGFMASSLVIWGVS 473

Query: 472 LLTGEPDEKVKAQHATFKKQLIE 494
            L G+P E          +QL E
Sbjct: 474 ALDGDPCENTIETFDEAGRQLAE 496