Pairwise Alignments

Query, 496 a.a., sodium/proline symporter PutP from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., SSS family solute/sodium (Na+) symporter (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (283), Expect = 1e-29
 Identities = 110/455 (24%), Positives = 215/455 (47%), Gaps = 59/455 (12%)

Query: 12  IVYLILMLAIGVYAYQRTK----NSADYFLGGRSLGPWPAALSAGASDMSGWLLLGLPGY 67
           +VY + +L + ++  ++ K    ++ DYFL G++L  W    S  AS++S   ++G+ G 
Sbjct: 11  LVYALGLLGLALWISRQDKRHERDTKDYFLAGKALPWWAIGASLIASNISAEQIIGMSGS 70

Query: 68  AYAAG--IESF-WLAGGLLVGTWANWLVNAKRLRTYSITTDSLTLPEFLSRRFNDNSKLI 124
            YA G  I S+ W+A   L+       +  K +    I  +  T+P++L +RF+   K  
Sbjct: 71  GYAIGLAIASYEWMAAITLI-------LVGKYMLPIFIKNEIYTMPQYLEQRFDKRVKT- 122

Query: 125 QTISAFFILLFFLFYTSSGLVAGGKLFETVFGLDYSTAVIIGTVCVVSYTLFGGFLAVSW 184
            T++ F++ ++ L   ++ L  GG   ETV G+D+   ++   +  ++Y+L+GG  AV++
Sbjct: 123 -TLALFWLSVYILVNLTAVLWLGGLAIETVAGIDWLYGMVFLALFSLAYSLYGGLKAVAY 181

Query: 185 TDLVQGLLMAAALMIVPIAAMN---------GGFTQLNHD--------LAAINPELLTLW 227
           TD++Q +L+    +++   A++          GF +L+          L+  NP  ++L 
Sbjct: 182 TDIIQVVLLIFGGLLLSYLALDRVADGQGVLAGFDRLSSALPEHFEMILSQSNPHYMSL- 240

Query: 228 NDAKGEPLSAIAIISLVAWGLGYFG-QPHILARFKASRSNKDLITARRIAVVWTGLSMAG 286
                 P  ++ +  L    + Y+G   +I+ R  A++S  +       A     L    
Sbjct: 241 ------PGISVLVGGLWIMNISYWGFNQYIIQRALAAKSVAEAQKGIAFAAYLKLLMPLI 294

Query: 287 AILVGLTGLIFVTQSGTIGLDDGEKIFMLLVNSLFHPVIAGILLAAILAAIMSTADSQLL 346
            +L G+  ++        GL+  ++ +  ++ +L    + G++ AA++AAI+S+  S   
Sbjct: 295 VVLPGIAAVLLYP-----GLESPDQAYPSMM-ALMPAGVKGLVFAALVAAIVSSLASMTN 348

Query: 347 VSSSALAEDFYKQVFKTDASSEDIVRVGRIAVILISLIALFLAMTPDSSVLGLVSYAW-- 404
             S+    D Y  + +   S    V VGR++    SLI+L +A+     +LG    A+  
Sbjct: 349 SISTIFTMDIY-AMLRPAKSEGHYVLVGRLS----SLISLLIALVMAQPLLGEFEQAFQY 403

Query: 405 -AGFGAAFGPALVL----SLYWPRMNRHGALSGII 434
              F   F P +V+     ++W R    GAL+  +
Sbjct: 404 IQEFTGVFTPGIVVIFLTGMFWRRATSQGALAAAL 438