Pairwise Alignments

Query, 496 a.a., sodium/proline symporter PutP from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

 Score =  168 bits (425), Expect = 5e-46
 Identities = 133/527 (25%), Positives = 240/527 (45%), Gaps = 53/527 (10%)

Query: 3   NSFAITTTFIVYLILMLAIGVYAYQRTKNSADYFLGGRSLGPWPAALSAGASDMSGWLLL 62
           N   +    ++YL+++  +G   ++ T ++ DY +GGR + P+  A+S GA+ +S   ++
Sbjct: 2   NILLLNVIVLIYLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIV 61

Query: 63  GLPGYAYAAGIESFWLAG-GLLVGTWANWLVNAKRLRTYSITTDSLTLPEFLSRRFNDNS 121
           G  G++   G+   WL    + +G +  ++   KR R      ++LT PE L++RF   S
Sbjct: 62  GFGGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRF--ES 119

Query: 122 KLIQTISAFFILLFFLFYTSSGLVAGGKLFETVFGLDYSTAVIIGTVCVVSYTLFGGFLA 181
           K IQ  S   I      Y ++ L+   +  ET   + +  A+++ ++ +  Y + GG   
Sbjct: 120 KFIQWFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKG 179

Query: 182 VSWTDLVQGLLMAAALMIVPIAAMN--GGFT---QLNHDLAAINPELLTLWNDAK----- 231
           V +TD  QG +M   ++ +     +  GG T   Q   +++ + P  L     A      
Sbjct: 180 VMYTDAFQGTIMFFGMLFLLYMTYDILGGVTTAHQAISNMSGLVPANLASVGHAGWTSMP 239

Query: 232 --GEPLSAIAIISLV-AWGLGYFGQPHILARFKASRSNKDLITARRIAVVWTGLSMAGAI 288
             G P+    + S++   G+G   QP ++ RF   +SN++L  A  I  V+  ++   A 
Sbjct: 240 TFGSPMWWTIVSSIILGVGIGVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAY 299

Query: 289 LVG-LTGLIFVTQSGTIGL----------DDGEKIFMLLVNSLFHPVIAGILLAAILAAI 337
           +VG L+ + F+   G + +           + + I  L +N         I L ++LAA 
Sbjct: 300 VVGTLSNVYFMNTEGVLSIGATVSEAFPTGNSDSIMPLYINKAMPEWFIYIFLVSLLAAA 359

Query: 338 MSTADSQLLVSSSALAEDFYKQVF-KTDASSEDIVRVGRIAVILISLIALFLAMTPDSSV 396
           MST  SQ     +++  D Y+ +  K   +S  I R+G I  I+I+ I  ++   P   V
Sbjct: 360 MSTISSQFHAQGTSIGRDVYETICGKKGLNSVIITRLGIIVAIVIAAILGYI--LPGGIV 417

Query: 397 LGLVSYAWAGFGAAFGPALVLSLYWPRMNRHGALSGIIVG---------------GVTIV 441
               +  +    AAF PA  L L+W R  + GA++G++ G                  + 
Sbjct: 418 ARGTALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLVFIHQAESAALG 477

Query: 442 VWKQLSG--------GWFDVYEIVPGIILSTLSIVVVSLLTGEPDEK 480
           + K L G         W  V  +V  + L+ ++ V+VSLLT  P ++
Sbjct: 478 ISKMLIGRDVLISAMPWPYVDPMVISLPLAFIATVIVSLLTKAPSKE 524