Pairwise Alignments

Query, 496 a.a., sodium/proline symporter PutP from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., hypothetical sodium/proline symporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  175 bits (443), Expect = 2e-48
 Identities = 98/223 (43%), Positives = 143/223 (64%), Gaps = 10/223 (4%)

Query: 182 VSWTDLVQGLLMAAALMIVPIAAMNGGFTQLNHDLAAINPELLTLWNDAKGEPLSAIAII 241
           +SWTD  Q  LM  AL+I+P A  +    + +  + +I+P +L L +D      + I ++
Sbjct: 1   MSWTDFFQASLMLIALLIIPFAVFSR--PESHAGIESIDPAMLALISDKT----TMIGLL 54

Query: 242 SLVAWGLGYFGQPHILARFKASRSNKDLITARRIAVVWTGLSMAGAILVGLTGLIFVTQS 301
           SL+AWGLGYFGQPHIL+RF A  +   L T+RRIA+ W  LS+ GA+  GL G ++    
Sbjct: 55  SLLAWGLGYFGQPHILSRFMAIGTVDALPTSRRIAMSWMILSLLGALATGLAGSVYFANE 114

Query: 302 GTIGLDDGEKIFMLLVNSLFHPVIAGILLAAILAAIMSTADSQLLVSSSALAEDFYKQVF 361
               L + E +F  L  + F+P I G+L+AAIL+AIMST DSQLLV SS + EDFY++  
Sbjct: 115 ---PLANAETVFFHLAQAAFNPWIGGLLIAAILSAIMSTIDSQLLVCSSVITEDFYRKWL 171

Query: 362 KTDASSEDIVRVGRIAVILISLIALFLAMTPDSSVLGLVSYAW 404
           +      +++ VGR+ V+ I++IA  +A+ P++SVL LVSYAW
Sbjct: 172 R-PTDDRELMMVGRMGVLAIAVIAGIIALNPENSVLNLVSYAW 213