Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  221 bits (563), Expect = 7e-62
 Identities = 133/350 (38%), Positives = 198/350 (56%), Gaps = 5/350 (1%)

Query: 292 GLGILLVMALLTSWFVARQLNELGNIANALADIAE--GDGDLTRRLDVRSQDEVGLLADK 349
           G+ +  + ALL   F++R ++    +A    D A+    GDLT+ +   S+DE G L   
Sbjct: 214 GIVVAFIAALLLGMFISRLISRPIAVA---VDCAQRIAQGDLTQHITSNSRDEAGQLLKA 270

Query: 350 FNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASA 409
                  L   ++ +   S  L   A+   A     S+ +  Q DEI   ATAVTEM SA
Sbjct: 271 LGDMQTSLKTTIQQIASASDQLASAAEELTAVTDDGSRALIRQNDEIQQAATAVTEMTSA 330

Query: 410 TAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEI 469
             E+A NA +T++ +  +     +G  Q + + Q+I+   QE+T +  ++ +L V   +I
Sbjct: 331 VEEVARNAVSTSQASQSTSSQASEGRDQARSAVQAINTATQEITSSTGLVKDLAVQVRDI 390

Query: 470 STILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKI 529
             +L  IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT AST EI++ I
Sbjct: 391 GKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQASTGEIESMI 450

Query: 530 AGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQS 589
             +Q    +AV  M +S  LV  +      TG +L+ I++ I QI+D    IA+A+EEQ+
Sbjct: 451 HAVQDRADSAVDAMGKSQALVTETQDLARATGEALEQIADNISQINDRNLVIATASEEQA 510

Query: 590 LVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
            V  +++ N  +++++S Q A  A Q+   ++ L  +A   N  + RF+L
Sbjct: 511 HVAREVDRNLVNIQDLSTQTAAGANQTNASSQELSNLALSFNSLVGRFRL 560