Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  298 bits (764), Expect = 4e-85
 Identities = 190/625 (30%), Positives = 329/625 (52%), Gaps = 18/625 (2%)

Query: 27  IAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGD--------WFLGKQLALKG 78
           I + A  +V A + +F   +    ++ +R  L  + +  G         W  G+ L ++G
Sbjct: 11  ILLGACVIVMAVFLSFSLFNDHRQQASTREALHRNLQATGQLLGANLDSWLAGRILLIEG 70

Query: 79  LREEIERNPQLELVPH-LRQTLQSGSFGLSYYGNEQGEMFRQDPSLNTADYDPRVRGWYK 137
             E I  +P  + +   L Q + + +F  SY G E    F     +    YD R R WYK
Sbjct: 71  AAETIAADPTPQTIGAILSQDIITKTFIASYVGLEDSRFFIHPERVMPDGYDVRQRAWYK 130

Query: 138 EAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLAIEVPG 197
           +A  + +P+ TEPY+   +  L++T A P++  G+ +GV  ++L+L++L K + A+++ G
Sbjct: 131 DAARSLEPVLTEPYIGAGIDYLIMTQAAPIKVDGKAVGVLGASLSLEQLAKIINAVDLNG 190

Query: 198 KGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMDGRDKVLM 257
            GYA LV+  GKI+ HP    + K   +   +   S +N A     L ++  +GR +++ 
Sbjct: 191 IGYAFLVSDDGKILVHPDNTRVTKTLAQAFPEGPPS-INSA-----LNEVQENGRTRIVT 244

Query: 258 AEEV---ANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVARQLNEL 314
              +    +  W + + +DK      L+      +   L  +LV   L    +   +  L
Sbjct: 245 FTPINGLPSLHWSIGLSVDKDKAYAVLHAFRASALVATLIAMLVTVGLLGLLINALMRPL 304

Query: 315 GNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQG 374
            ++ +A+  IA+G+GDLT+RL   S+DE G++A  FN+FV+R+ Q ++ V   SV LTQ 
Sbjct: 305 RSMGSAMQSIADGEGDLTQRLHSLSRDEFGMMAGGFNRFVERIQQSIREVLASSVQLTQL 364

Query: 375 ADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDG 434
           A   + ++  + K   TQ      VATA+ E+ +A  EIA +A + +  A+ +    ++G
Sbjct: 365 AAQVSQASNASLKSSDTQAALTHNVATAINELGAAAQEIARSAAHASSRASDTRDQTQEG 424

Query: 435 FAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEA 494
            + +Q+S  ++ QL+ ++    + I  L     +I  IL  I+GI++QTNLLALNAAIEA
Sbjct: 425 QSVVQRSISAMSQLSSQVVNTRQDIESLNEKTLKIGRILDVIKGISDQTNLLALNAAIEA 484

Query: 495 ARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSV 554
           ARAG+ GRGFAVV+DEVR L+ RT  S +EI + I  LQ    +AVS M ES +  + +V
Sbjct: 485 ARAGDAGRGFAVVSDEVRTLAHRTQQSAQEIHSMIEELQAGAGSAVSAMLESQRHSDDNV 544

Query: 555 ADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQ 614
                 G  L  +   I +I ++   +A+A EEQ+ V  +++ +   + +++ ++    Q
Sbjct: 545 TTARLAGERLNRVLMGIGEIDEINLSVATATEEQTSVVDNLDRDISHINDLNQEMVGNLQ 604

Query: 615 QSVQQAKSLHAMAQELNKEISRFKL 639
            ++Q    L   ++ L + ++ FK+
Sbjct: 605 STLQACTELENQSRRLQQMVNTFKI 629