Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  311 bits (796), Expect = 7e-89
 Identities = 197/630 (31%), Positives = 333/630 (52%), Gaps = 19/630 (3%)

Query: 21  FSVVVAIAVTAAALVAAGYQTFEKDSWR------AIESESRNTLQAHAKGIGDWFLGKQL 74
           FS  + +A +   ++A    T   D  +      ++ES    +    A  I +W  G+ L
Sbjct: 5   FSHKILLAASGVVVLAFALFTLYNDYLQRNTIGSSLESSIEQSGDLTASSIQNWMSGRIL 64

Query: 75  ALKGLREEIERNPQLELVPHL-RQTLQSGSFGLSYYGNEQGEMFRQDPSLNTAD-YDPRV 132
            L+ L + I        +P L  Q   + +F  +Y G   G +F Q P     D YDPR 
Sbjct: 65  VLENLAQNIAHQGTAADLPGLVDQPALTSNFQFTYVGQANG-VFTQRPDAKMPDGYDPRQ 123

Query: 133 RGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLA 192
           R WYK+A  A K + T PY++  +  LVVT+A PV++ G+L+GV   +L+L+ L+K + +
Sbjct: 124 RPWYKQAVTADKTMLTPPYLAA-VGGLVVTVALPVKHNGELLGVVGGDLSLETLVKIINS 182

Query: 193 IEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMDGR 252
           ++  G G+A LV+  G+++  P +D ++K  +++     + ++    +D     + ++G+
Sbjct: 183 VDFGGIGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPGTPV-RIGKGIQD-----VELNGQ 236

Query: 253 DKVLMAEEVA---NTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVAR 309
           D++L    V    N +W + + +DK     PL+      +      +  +ALL S  +  
Sbjct: 237 DRILSFTPVTGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFVAVAAIALLLSLLIQV 296

Query: 310 QLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSV 369
            +  L  +  A+ DIA+G+GDLTRRL V+ +DE  +L   FN+FV+R+H  +  V   + 
Sbjct: 297 LMRPLTTMGRAMQDIAQGEGDLTRRLVVQGKDEFAVLGGSFNQFVERIHASISEVSSATR 356

Query: 370 ALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQ 429
            +   +     S+  +      Q      VA A+ ++ +AT EIA NA + +++A+ + +
Sbjct: 357 QVHDLSQRVMTSSNASLVGSDEQSARTNSVAAAINQLGAATQEIARNAADASQHASGASE 416

Query: 430 LGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALN 489
             +DG   ++++ Q++ +L+Q+++ +   I  L    + I  IL  I+GI++QTNLLALN
Sbjct: 417 QADDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALN 476

Query: 490 AAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKL 549
           AAIEAARAGE GRGFAVVADEVR L+ RT  S EEI   I  LQ  +  AV+ M  S   
Sbjct: 477 AAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTS 536

Query: 550 VETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQL 609
            E SV   NQ G  L ++++ I +I  M   +A+A EEQ+ V   +N++   +  ++ Q 
Sbjct: 537 SEESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNMDVSHINLLNQQS 596

Query: 610 AEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
                ++++   +L   A  L + +  FK+
Sbjct: 597 VANLNETLKDCDALSQQANRLKQLVDSFKI 626