Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  314 bits (805), Expect = 7e-90
 Identities = 194/633 (30%), Positives = 327/633 (51%), Gaps = 13/633 (2%)

Query: 13  LSLKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGDWFLGK 72
           +    K++ +  + +AV  A  +        +    + E+  +      ++ I  W  G+
Sbjct: 1   MKFSHKILLAAALVVAVAFACFILFNDYRQRQSLNASTETSMQELGSLTSRNIQTWVDGR 60

Query: 73  QLALKGLREEIERNPQL--ELVPHLRQTLQSGSFGLSYYGNEQGEMFRQDPSLNTADYDP 130
              L+ L ++I  +      L   +     + +F LSY+G   G MF        ADYDP
Sbjct: 61  IQLLQSLAQQIAADGSSADSLKRAVGLPAYTSNFQLSYFGGTDGVMFSVPAGNRAADYDP 120

Query: 131 RVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDV 190
           R RGWYK A +A + I TEPY++ +   LV+T+A PV++Q Q+IGVA +++ L  +   +
Sbjct: 121 RARGWYKAANSAQQTIVTEPYIAASSGKLVITVATPVQHQNQMIGVAGADIDLSSVSAII 180

Query: 191 LAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMD 250
            ++   G G+A +V+  GKI+ HP    +LK   E        +++   K+     + +D
Sbjct: 181 NSLNFGGHGHAFIVSADGKILIHPDSKRVLKTLAEAYPN-GAPQISPGVKE-----VDLD 234

Query: 251 GRDKVLM---AEEVANTDWLLVMVMDKGVLEQPLNDM-LMVQIGIGLGILLVMALLTSWF 306
           G+ + +       V   DW + +V+DK      L++      I + + ++ ++ALL    
Sbjct: 235 GKTQFISFTHVNGVPGADWYVALVLDKDTALAMLSEFRTSALIAMVIAVVFIIALL-GML 293

Query: 307 VARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVRE 366
           +   +  L  +  A+ DIAEG+GDLTRRL +   DE G L   FN+FV+R+H  ++ V  
Sbjct: 294 IRVLMQPLLTMGRAMHDIAEGEGDLTRRLVIHGHDEFGALGTSFNRFVERIHTSIREVAS 353

Query: 367 VSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQ 426
            +  + + A    +++  +      Q    + VA A+ ++ +A  EIA NA   +++++ 
Sbjct: 354 ATGQVNEVALRVVSASNSSMFNSDQQASRTSSVAAAINQLGAAAQEIAQNAALASQHSSD 413

Query: 427 SVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLL 486
           +  L EDG   + ++  ++ QL+ +++ +   I  L  +   I  IL  I  I++QTNLL
Sbjct: 414 ARSLAEDGQQVVDKTIAAMQQLSAKISDSCGNIETLNSNTVNIGQILEVITSISQQTNLL 473

Query: 487 ALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTES 546
           ALNAAIEAARAGE GRGFAVVADEVR L+ RT  S +++Q  I  LQ     AV  MT+S
Sbjct: 474 ALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQDSAQQVQKMIEELQVGAREAVLTMTDS 533

Query: 547 HKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVS 606
            +  E+SV   NQ G  L ++++ I +I  M   +A+A EEQ+ V   INV+   +  ++
Sbjct: 534 QRQSESSVGIANQAGERLGSVTQRIGEIDGMNQSVATATEEQTAVVESINVDITEINTLN 593

Query: 607 DQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
            +  E  Q +++    L   A  L + +  F++
Sbjct: 594 QEGVENLQATLRACADLEQQAARLKQLVGSFRI 626