Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  263 bits (673), Expect = 2e-74
 Identities = 188/516 (36%), Positives = 285/516 (55%), Gaps = 26/516 (5%)

Query: 146 ITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLAIE----VPGKGYA 201
           I   PY   +  T++ +  EP+   GQ  G+  ++L+++  I+D+L         G G  
Sbjct: 201 IDPAPYRVGSTMTMLASFIEPIMIDGQFQGIVGADLSVN-FIQDMLVAADGKLYDGAGEM 259

Query: 202 ILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKL-NIAAKDHSLFQLSMD---GRDKVLM 257
            L++   ++VA  T+D   K  E+ S  L  S L N+A       +  +D   G  +V M
Sbjct: 260 ALLSSNNRLVAF-TKDPS-KLGEKASDLLDASALDNLAKLGDGEVRYDIDEAHGHIEVYM 317

Query: 258 AEEVANTD--WLLVMVM-------DKGVLEQPLNDMLMVQIGIGLGIL-LVMA---LLTS 304
              +  T+  W L++ +       D   L++ L+      I  G+ I+ LV+A   LL  
Sbjct: 318 PFGIGETNARWTLMLQLPLNAVMADLQALQKDLDHQRQADI-FGMAIVGLVIAGIGLLVI 376

Query: 305 WFVARQL-NELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKN 363
           W V   +   L  +   L DIA+G+GDLTRRL     DE+G +A  FN F+ +L  M+  
Sbjct: 377 WLVGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARGFNTFLSKLQGMITQ 436

Query: 364 VREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKN 423
           V     +++  ++H A  A + ++ +  Q  EI  VATAV EM +   ++A NA   A+ 
Sbjct: 437 VVTSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTATAQDVARNATQAAQA 496

Query: 424 ATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQT 483
           A+ + Q    G   ++ +  SI  LA E+  AV ++  L   +  I+ IL+ IRGIAEQT
Sbjct: 497 ASHADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENINAILTAIRGIAEQT 556

Query: 484 NLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVM 543
           NLLALNAAIEAARAGEQGRGFAVVADEVR L+Q+T  +TEEIQT I  LQ+ T   V VM
Sbjct: 557 NLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQTMIQQLQQGTRDVVRVM 616

Query: 544 TESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVR 603
            +S    + SV    +   +L+ I++A+  I+DM TQIASAAEEQS V  DIN N  ++ 
Sbjct: 617 EDSQTRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQSAVADDINRNVINIG 676

Query: 604 EVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           +V++++A  A +S   +  L  +A++  + I++F++
Sbjct: 677 QVANEVASGADESSAASAGLTKLAEQQRRLINQFRV 712