Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  255 bits (652), Expect = 4e-72
 Identities = 205/658 (31%), Positives = 323/658 (49%), Gaps = 44/658 (6%)

Query: 13  LSLKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWRA--IESESRNTLQAHAKGIGDWFL 70
           +++K+K+ ++   AIA     LVA       +D+ +A  ++S  R   Q    G+  +F 
Sbjct: 1   MNIKQKLTWAFA-AIACLPVILVAVLVVLNLRDAAKANFLDSSGREIRQID-NGMKQFFD 58

Query: 71  G------------KQLALKGLREEIERNPQLELVPHLRQTLQS--GSFGLSY-------Y 109
           G            + +A KGL+     +   +  P + Q L      F  S+        
Sbjct: 59  GISQNVEFFAKDPRVIAAKGLKSYAGADAAQQPFPEINQQLLDIFERFAKSHPTTAYLSV 118

Query: 110 GNEQGEMFRQDPSLNTADYDPRVRGWYKEAKAA-GKPITTEPYV----SVTMQTLVVTLA 164
           G E G           A+YDPRVR WYK A AA G  + T+ Y      V++   V T+A
Sbjct: 119 GMEDGGYASWPDDPKMANYDPRVRPWYKAAMAAPGTNVRTDAYYWAPDDVSLIGTVHTVA 178

Query: 165 EPVRYQGQLIGVAASNLALDKLIKDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTE 224
           +     G+ IGV   +++L +L + V  I++   GY +LV   G ++  P      K   
Sbjct: 179 DA---SGKPIGVVGLDVSLKQLTELVKNIKLGESGYLMLVEANGNVLVDPAD---AKHNF 232

Query: 225 EMSAQLTISKLNIAAKDHSLFQLSMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDM 284
           +  A L  +   +A     + Q+ +DG   +          W  + ++ +  +    + +
Sbjct: 233 KPLADLGPNYAELAKSSDGVTQIEIDGVPYMANVVSSKGLGWRFIGLIKRDEVMAEASSL 292

Query: 285 LMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVG 344
             +   I   + +V AL+ + F +  +  +  +AN L +IAEG+GDLTR+L V+ +DE  
Sbjct: 293 TWLIAAIAAVLAVVFALVGASFASVIVRPIRGVANGLQEIAEGEGDLTRKLTVQGKDETA 352

Query: 345 LLADKFNKFVDRLHQMVKNVREVSVAL-TQGAD--HAAASATQASKRIRTQQDEITMVAT 401
            LA  FN+F+  + Q+++ +   S  L T  AD  H A +   A+ R   Q+  + +V+T
Sbjct: 353 TLAGWFNQFLGMIAQLMQRIGSASSDLQTAAADTSHVAQNMNDAAGR---QRQAVELVST 409

Query: 402 AVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISE 461
           A  EM +   E+A +    A +A +  +   DG   + ++  S+ +L+ +L  + + +  
Sbjct: 410 AFNEMVATANEVARSCSQAASSADEGYRDVHDGQHHIGEATGSVMKLSDDLQKSTQTMQA 469

Query: 462 LEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHAS 521
           LE  +  I+TIL TIR IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR L++RT  S
Sbjct: 470 LEQDSKNINTILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADS 529

Query: 522 TEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQI 581
           T EI + +  L + T      M  S ++ +TSV  + Q   S   I  ++  I D  TQI
Sbjct: 530 TGEIDSLLGNLARRTQEVTQQMQSSLQVSQTSVERIQQARDSFDKIRNSVDSIRDQNTQI 589

Query: 582 ASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKS-LHAMAQELNKEISRFK 638
           A+AAEEQ  V  DIN +   +     QL EE   S Q     L  ++ +L   + RF+
Sbjct: 590 ATAAEEQHQVAEDINRHIAQI-HADAQLVEEFAHSAQTGSGRLTDISGQLKGLVGRFR 646