Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  239 bits (611), Expect = 2e-67
 Identities = 160/536 (29%), Positives = 272/536 (50%), Gaps = 12/536 (2%)

Query: 110 GNEQGEMFRQDPSLNTADYDPRVRGWYKEAKAA-GKPITTEPYVSV-----TMQTLVVTL 163
           G E G   +       A+YDPR R WYK A A+ GK + T  +            LV T 
Sbjct: 81  GLEDGSYAKWPDDPQLANYDPRSRPWYKAAMASPGKTVRTPAFYPAYDYGKEDAALVGTA 140

Query: 164 AEPVRYQGQLIGVAASNLALDKLIKDVLAIEVPGKGYAILVNQKGKIVAHPTQDL-ILKP 222
              +   G + GV A N++L  L + V +I++   GY +L+ + G ++  P       KP
Sbjct: 141 RAMITSDGIVKGVLAVNVSLKNLTELVKSIKLGESGYVMLI-EDGIVLVDPRDTTHSFKP 199

Query: 223 TEEMSAQLTISKLNIAAKDHSLFQLSMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLN 282
            +++ A        +A       ++ ++G   +       +  W  + ++++  +     
Sbjct: 200 LKDLGAAYA----KLATIPQGSTEVELNGIPYMANVWTSPDLGWRYIGLIERSEVMSAAT 255

Query: 283 DMLMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDE 342
            M  +   I  G+ ++ AL+   F    +  +  ++  L  IA+G+GDL R L+ +  DE
Sbjct: 256 RMTYLTTLIVGGLTVIFALVAVAFSKSIVKPISQVSTGLQSIAQGEGDLRRELEFQGNDE 315

Query: 343 VGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATA 402
              LA  FNKF+  + Q+++++   S  L   +   +  A   ++    Q++ + +V+TA
Sbjct: 316 TAELAGWFNKFLSAIRQLIQHIGAASSNLQNASRVNSEVANNMNEAAGRQREAVELVSTA 375

Query: 403 VTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISEL 462
             EM +   E+A +    A++A    +   +G  Q++ +  ++++L + LT + + ++EL
Sbjct: 376 FNEMVATANEVARSCSGAAESAENGHRRVAEGKQQIEITTDNVNRLGRRLTESSQSMTEL 435

Query: 463 EVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHAST 522
           E  +  I+ IL TIR IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR L++RT  ST
Sbjct: 436 EAGSRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDST 495

Query: 523 EEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIA 582
            EI+  +  L   T   +  M    +L   SV+ +  T  S + I  ++ +I D   QI+
Sbjct: 496 GEIEQLLGALGSKTQEVMGKMGSCLELSHASVSSIESTRDSFEGIQLSVNEIRDQNLQIS 555

Query: 583 SAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFK 638
           +AAEEQ  V  +IN + + + + +  +   A  +   +  L +++ ELN  + RFK
Sbjct: 556 AAAEEQHSVAEEINRHIQQIYDEARLVESLANSAQDDSGKLSSLSDELNGLVGRFK 611