Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  298 bits (764), Expect = 4e-85
 Identities = 189/625 (30%), Positives = 311/625 (49%), Gaps = 18/625 (2%)

Query: 27  IAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGD--------WFLGKQLALKG 78
           I + AA +V A + +F   +     +  R  L  +   +GD        W  G+ L ++ 
Sbjct: 11  ILLAAALIVIAAFASFTLYNDYLQRNAIRQDLDNYLHEMGDVTSSNIQSWLAGRILMVEN 70

Query: 79  LREEIERNPQLELVPHL-RQTLQSGSFGLSYYGNEQGEMFRQDPSLNTADYDPRVRGWYK 137
           L + I  NP+   V +L  Q   + +F   Y G+  G    +  S     YDPRVR WYK
Sbjct: 71  LAQNIALNPEQGNVSNLLEQNALASTFMARYLGDASGTFINRPDSKMPDGYDPRVRPWYK 130

Query: 138 EAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLAIEVPG 197
            A  +     TEPY+       ++++A   +  GQ +GV   +L+L  LI  + A +  G
Sbjct: 131 GAVNSNGSTLTEPYIDAATGQTIISIATASKKAGQSVGVVGGDLSLQTLIDTLTARDFGG 190

Query: 198 KGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMDGRDKVLM 257
            GYA LV+  GKI+ HP + +++K   E          N       + ++ ++G+ +++ 
Sbjct: 191 MGYAFLVSADGKILVHPDKTMVMKSLSEAYPT------NTPRIGGGISEVEVNGKTRIVT 244

Query: 258 AEEVA---NTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVARQLNEL 314
              +    + +W + + +DK      L+      I   +  + ++  L    +   +  L
Sbjct: 245 FTPIKGLPSVNWYVGLSVDKDKAFSMLSSFRTSAIIATIIAVAIIIALLGMLIRILIQPL 304

Query: 315 GNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQG 374
             +  A+ DIA+G+GDLTRRL ++SQDE G+L   FN+FV+R+H  ++ V   +  + + 
Sbjct: 305 HVMTRAMQDIADGEGDLTRRLTIQSQDEFGILGSAFNRFVERIHGSIREVSSATEHVNEV 364

Query: 375 ADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDG 434
           A    +++  +      Q      VA A+ ++ +A  EIA NA   +  A+ +  L EDG
Sbjct: 365 ALRVVSASNSSMLNSDEQSSRTNSVAAAINQLGAAAQEIARNAAQASHQASDARSLAEDG 424

Query: 435 FAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEA 494
              + +S  +++QL+  L+ +   I  L      I  IL  I  I++QTNLLALNAAIEA
Sbjct: 425 QQVVDRSIAAMNQLSSMLSASSTNIESLNSKTVNIGQILEVITSISQQTNLLALNAAIEA 484

Query: 495 ARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSV 554
           ARAGE GRGFAVVADEVR L+ RT  S +++QT I  LQ     +VS M++S +  + SV
Sbjct: 485 ARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQIGARESVSTMSDSQRHSQDSV 544

Query: 555 ADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQ 614
              N  G  L +++  I +I  M   +A+A EEQ+ V   INV+   +  ++ +  E  Q
Sbjct: 545 EIANLAGERLNSVTLRIGEIDGMNQSVATATEEQTAVVESINVDINEINTLNQEGVENLQ 604

Query: 615 QSVQQAKSLHAMAQELNKEISRFKL 639
            +++    L   A  L + +  F++
Sbjct: 605 STLRACSDLEQQAARLKQLVGSFRI 629