Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  321 bits (823), Expect = 5e-92
 Identities = 210/629 (33%), Positives = 329/629 (52%), Gaps = 26/629 (4%)

Query: 27  IAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGD--------WFLGKQLALKG 78
           I + A+ +V A +  F   +     +  R+ L ++   +GD        W  G+ L ++ 
Sbjct: 11  ILLAASLIVIATFSLFTLFNDYLQRNAIRDNLNSYLDEMGDVTAHNIQNWLSGRILLVES 70

Query: 79  LREEI-ERNPQLELVPHLRQTLQSGSFGLSYYGNEQGEMFRQDPSLNTADYDPRVRGWYK 137
             + I   + +  +   L Q   + +F  SY G + G    +      ADYDPR R WYK
Sbjct: 71  AAQSIGSDDAEARVAELLEQKALASTFMFSYLGGQDGSFLMRPAEEMPADYDPRARPWYK 130

Query: 138 EAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLAIEVPG 197
           +A AAG    TEPYV      LV+++A P +  G+ IGV   +L L  L++ + A++  G
Sbjct: 131 DAIAAGGSTLTEPYVDAASGELVISIATPAQQNGRNIGVVGGDLGLKVLVEIINALDFNG 190

Query: 198 KGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMDGRDKVLM 257
            G+A LV+  GKI+ HP    ++K   E+    T S       D +  +  +DG+ ++L 
Sbjct: 191 MGHAFLVSGDGKILVHPDGSKVMKSLGELFPGHTPSL------DANYSEAELDGQTRILS 244

Query: 258 AEEVA---NTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVARQLNEL 314
              V    +  W + + +DK      L       +   L  + V+ LL    +   +  L
Sbjct: 245 FSRVQGLPSVSWYVGISLDKAKAYAALASFRTSAVVAALTAVGVILLLLGMLMRVLMRPL 304

Query: 315 GNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQG 374
            ++  A+A+IAEG+GDLTRRL V+S+DE G LA  FN+FV+R+H    ++REVS A TQ 
Sbjct: 305 TDMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHT---SIREVSSA-TQQ 360

Query: 375 ADHAAASATQASKRIRTQQDE----ITMVATAVTEMASATAEIASNAENTAKNATQSVQL 430
            +  AA    AS       DE       VA A+ E+ +A  EIA NA + ++ A+ +   
Sbjct: 361 VNEVAARVLAASNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQQASGARHQ 420

Query: 431 GEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNA 490
            EDG   ++Q+  ++ +L+ +++ +   I  L     +I  IL  I+GI+EQTNLLALNA
Sbjct: 421 AEDGRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQTNLLALNA 480

Query: 491 AIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLV 550
           AIEAARAGE GRGFAVVADEVR L+ RT +S +EIQ  I  LQ     +V  MTES +  
Sbjct: 481 AIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMTESQRQS 540

Query: 551 ETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLA 610
           E+SV+  ++ G  L  +++ I +I  M   +A+A EEQ+ V   +N++   +  ++ Q  
Sbjct: 541 ESSVSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEINTLNQQGV 600

Query: 611 EEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           E  Q +++    L   A+ L + +  F++
Sbjct: 601 ENLQSTLRACGDLDQQARRLKQLVDSFRI 629