Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  221 bits (564), Expect = 5e-62
 Identities = 134/371 (36%), Positives = 209/371 (56%), Gaps = 8/371 (2%)

Query: 273 DKGVLEQPLNDMLMVQIGIGLGILL----VMALLTSWFVARQLNELGNIANALADIAEGD 328
           D   L+Q ++  +M+   I L +L+    VM +     + R++N + +  NA+A+    D
Sbjct: 173 DLKALDQEVDRNIMISGAIQLLLLVIGVVVMCMTVRHVIIRRINAMRHTMNAMAE----D 228

Query: 329 GDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKR 388
            DL+R + + ++DE+G + D FN+ + +    ++ V  V+  LT  ++  +  A +    
Sbjct: 229 EDLSRSVAIGAKDEIGAMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAA 288

Query: 389 IRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQL 448
           +  Q+ E  MVA+A+ EM++   E+A NA  TA  +  +    + G     ++   I+ L
Sbjct: 289 VNEQRSETDMVASAMNEMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVL 348

Query: 449 AQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVA 508
             E+  A ++I  +E  +  I  +L  I GIAEQTNLLALNAAIEAARAGEQGRGFAVVA
Sbjct: 349 IAEIEKAAQVIQRVESDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVA 408

Query: 509 DEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAIS 568
           DEVR L+ RT  STEEIQ  I  LQ     AV  M E+     +    V +   SL  I+
Sbjct: 409 DEVRTLASRTQKSTEEIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIA 468

Query: 569 EAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQ 628
             +  I++M TQIA+AAE+QS V  +IN N  ++  ++D  + +A Q+ + +  L  +A 
Sbjct: 469 TEVGTINEMNTQIATAAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLAT 528

Query: 629 ELNKEISRFKL 639
           ELN+ + +FKL
Sbjct: 529 ELNRLVGQFKL 539