Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  222 bits (565), Expect = 4e-62
 Identities = 136/359 (37%), Positives = 209/359 (58%), Gaps = 8/359 (2%)

Query: 281 LNDMLMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQ 340
           LN  L++ + IG G L  M LL S  ++R L EL   A ++A      GDL+R +  R +
Sbjct: 189 LNIGLLLALLIGGG-LFAMVLLRS--ISRPLEELKQAAASVAA-----GDLSRTIACRGK 240

Query: 341 DEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVA 400
           DE+  +     +    L   +++++  +  L   A+   A     ++ I  Q +E+ M A
Sbjct: 241 DEITEVQQSIRQMQQTLRDTLQDIQGSATQLASAAEELHAVTQHTAQGIHQQNEEVQMAA 300

Query: 401 TAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIIS 460
           TAVTEM++A  E+A NA  T+  +  +  + +DG  Q+  ++Q+IDQL+++L      ++
Sbjct: 301 TAVTEMSAAVDEVAGNANRTSDASRDAETVADDGRRQVTATRQTIDQLSEKLQQTAGTVT 360

Query: 461 ELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHA 520
            L   A  I  ++  IR IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+QRT +
Sbjct: 361 RLAEEAASIGQVVDVIRAIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQS 420

Query: 521 STEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQ 580
           ST+EI+  I  +Q  T  +V  M +S +    S     +   +L  I+E + QI++M   
Sbjct: 421 STQEIERMIGAIQSATEQSVRDMQQSSEFATRSQTMAGEADQALGLIAERVGQINEMNLV 480

Query: 581 IASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           IASAAEEQ+ V  +++ N  ++R++S+Q A  AQQ+   +  L  +A  LN+ + RF+L
Sbjct: 481 IASAAEEQAQVAREVDRNLVAIRDISEQSATGAQQTSVASDELARLATHLNQLVGRFRL 539