Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  216 bits (551), Expect = 2e-60
 Identities = 135/368 (36%), Positives = 199/368 (54%), Gaps = 5/368 (1%)

Query: 277 LEQPLN---DMLMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAE--GDGDL 331
           L+  LN   D L++Q  + + + ++M LL  +        L    ++L  +    G+GDL
Sbjct: 307 LQNELNTRYDALVLQREVVIAMCVIMGLLLLYAFCSIYRALRLTIDSLLGVTRRLGEGDL 366

Query: 332 TRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRT 391
           + R+ V S+DEV  +A+  N   D     + ++   S  LT  A    AS   A + +  
Sbjct: 367 SARVAVVSKDEVADIANGLNLMADAFASSISHMDRTSYELTDVASRLGASIGLAKQSMNA 426

Query: 392 QQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQE 451
           QQ E   VATA+ EM ++ A++A N E  A  A ++     +G   M Q+  +I  LA+E
Sbjct: 427 QQAETEQVATAINEMTASVADVAQNTEGAALAADEANTASRNGLRIMHQAHSTIQALAEE 486

Query: 452 LTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 511
           +  + + +  L +H+  I  ++  I  IA+QTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 487 VELSAQKVQALALHSQSIGGVIQVISTIADQTNLLALNAAIEAARAGEQGRGFAVVADEV 546

Query: 512 RVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAI 571
           R L+ RT ASTEEI+  I  LQ  T  AV  M    +     ++  +    SL +IS+ +
Sbjct: 547 RTLASRTQASTEEIRGIIQQLQSATDAAVQQMQAGQQKAHACISAASDASGSLSSISQGV 606

Query: 572 QQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELN 631
           ++I +M TQIASAA +Q  V+ DIN N   +R  S  L      +   A  L  +A ++ 
Sbjct: 607 ERIVEMNTQIASAAVQQHAVSEDINRNVMEIRNSSGTLMLGIDNNAVTADELARVASDMR 666

Query: 632 KEISRFKL 639
             ++RFKL
Sbjct: 667 NVVARFKL 674