Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  240 bits (612), Expect = 1e-67
 Identities = 136/346 (39%), Positives = 201/346 (58%)

Query: 294 GILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKF 353
           GI+L+M LL    V   +  L     A+A IA G+ DLTR L+    DE+  L   FN F
Sbjct: 198 GIVLIMVLLLVTIVRSIVRPLRAAVGAMASIASGESDLTRTLETHGNDEITELGTHFNAF 257

Query: 354 VDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEI 413
           V +L  +V  ++  +VAL Q +    + A QA  R   Q  ++ +VATAV E+     ++
Sbjct: 258 VAKLRNVVGQLQHSAVALGQASTDLGSDAEQAQSRSEQQSQQMDLVATAVNEVTYGVQDV 317

Query: 414 ASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTIL 473
           A NAE+ A     +    + G   +  S + I+ L+  +  AV+++  L   + +I ++L
Sbjct: 318 AKNAEHAASEMRDAESQAQQGQINIDNSLRQIEHLSSTIGQAVQVMQSLASESTQIGSVL 377

Query: 474 STIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQ 533
             I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+L+QRT  ST EIQ+ I  LQ
Sbjct: 378 EVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQSMIERLQ 437

Query: 534 KVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTA 593
           K +  AV V+ +S +  + ++   NQ G SL +IS+A++ ++ +   IASA  +Q+ V  
Sbjct: 438 KHSDAAVKVIGDSSRSSQLTIEQANQAGQSLTSISQALRNLNSLNASIASATLQQTHVVD 497

Query: 594 DINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           DIN N     ++S   A  A+QS   +  L  +++ELN  + +F++
Sbjct: 498 DINQNVTQAAQLSQSTALAAEQSTSASLHLRGLSEELNTLLKQFRV 543