Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  221 bits (562), Expect = 1e-61
 Identities = 164/567 (28%), Positives = 278/567 (49%), Gaps = 36/567 (6%)

Query: 102 GSFGLSYYGNEQGEMFRQ---DPSLNTAD----YDPRVRGWYKEAKAAGKPITTEPYV-- 152
           G+  + +Y N+ G   +    D +   AD    +  R   WY  AK   KP   EPY+  
Sbjct: 145 GTLEVYFYRNDDGSQTQSQVDDANEKYADTLNEFGLREAEWYLCAKDTQKPCLMEPYLYE 204

Query: 153 -----SVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLAIEVPGKGYAILVNQK 207
                ++ M +L V +    R++G ++GV  +     K+I+++ A    G+    L++ K
Sbjct: 205 ITPGNNMLMTSLTVPIVRGGRFRG-VVGVDLNLPVFQKMIEELSASLYQGQAKVTLLSTK 263

Query: 208 GKIVAHPTQDLILKPT-EEMSAQLTISKLNIAAKDHSLFQLSMDGRDKVLMAEEV----A 262
           G IVA    D   +P  E +   L    L +   D  L   S      +++A  +    +
Sbjct: 264 GLIVAASHYDKKARPLGEAIDKSLANQILGLGKGDGYLLNDS-----SMIVAYPINIPLS 318

Query: 263 NTDWLLVMVMDKGVL----EQPLNDM--LMVQIG-----IGLGILLVMALLTSWFVARQL 311
            + WLL + + + +     EQ    M  +   +G     +G+GI  V  +L + F+   +
Sbjct: 319 GSQWLLAIEVPRQIALASAEQVEGSMQAMAASLGRFVLLLGIGIAAVAVILIALFIRSVV 378

Query: 312 NELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVAL 371
             +  I   ++ +A  +GDLT+ L V    E+  L + FN F+ +LH ++  +++V+   
Sbjct: 379 APIQQIQQRVSQLASAEGDLTQSLKVDEHAELIALGNGFNAFIGKLHGLISELKKVATES 438

Query: 372 TQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLG 431
              +   A  A +  + +  Q  EI  V TAV EM+    E+A  +E TA  +       
Sbjct: 439 RNESQATARIAEETKQSVNRQYSEIESVVTAVNEMSHTAHEVAKASEQTASESAAMASQV 498

Query: 432 EDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAA 491
           +     + Q+   +  +++E   A   + ++   +  IS IL  I  IA QTNLLALNAA
Sbjct: 499 KVSQDSLTQAVSLVSTMSKESLQAKIAVGKVAESSTNISKILEVISAIAAQTNLLALNAA 558

Query: 492 IEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVE 551
           IEAARAGEQGRGFAVVADEVR L+ +T AST++I   I  L++    A  ++ +   L E
Sbjct: 559 IEAARAGEQGRGFAVVADEVRSLASKTQASTDDISRLIDALEQEVKGASGIIDKGVGLAE 618

Query: 552 TSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAE 611
            +VA   Q   +L  +   I +IS+  TQIA+AAEEQS VT +++ N   + + + +L +
Sbjct: 619 QAVAQTEQAFEALSVMVAGINEISNQVTQIATAAEEQSAVTEEVSRNITGISDSAAELMD 678

Query: 612 EAQQSVQQAKSLHAMAQELNKEISRFK 638
            A ++ + ++SL  +      ++++ +
Sbjct: 679 LAGKARESSESLAKLVGRQESQLAKLR 705