Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  267 bits (682), Expect = 1e-75
 Identities = 185/523 (35%), Positives = 283/523 (54%), Gaps = 23/523 (4%)

Query: 137 KEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLAIE-- 194
           KE+K A   I   PY       ++ +  EP+   G   G+  ++L+++  I+D+L     
Sbjct: 193 KESKKACA-IDPAPYKVGNAMVMLASFIEPIMIDGTFQGIVGADLSVN-FIQDMLTSADQ 250

Query: 195 --VPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMD-- 250
               G G   L++  G++VA+ T+D      +      T  + N+A       +  +D  
Sbjct: 251 NLYNGAGELALISSNGRLVAY-TKDASKLGEKSSDLLDTNEQANLAQLKAGEVRYDIDRE 309

Query: 251 -GRDKVLMAEEVANTD--WLLVMVM-------DKGVLEQPLNDMLMVQI-GIGLGILLV- 298
            G  ++ +   +  TD  W L+M +       D   L+  L+      I G+ +  LL+ 
Sbjct: 310 HGHIELFLPFNIGQTDARWTLMMQLPLNAVMADLHTLQSDLDAQRKADIVGMAIAGLLIA 369

Query: 299 -MALLTSWFVARQL-NELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDR 356
            + LL  W V   +   L  +   L DIA+G+GDLTRRL     DE+G +A+ FN F+ +
Sbjct: 370 GIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIK 429

Query: 357 LHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASN 416
           L  M+  V      ++  ++H A  A + ++ +  Q  EI  VATAV EM +   ++A N
Sbjct: 430 LQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARN 489

Query: 417 AENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTI 476
           A   A+ A+ + Q    G   ++ +  SI  LA+E+  AV ++  L   +  I+ IL+ I
Sbjct: 490 ATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVGVVQTLAKDSENINAILTAI 549

Query: 477 RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVT 536
           RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+Q+T  +TEEIQ  I  LQ+ T
Sbjct: 550 RGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQAMIQQLQQGT 609

Query: 537 TTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADIN 596
              V VM +S    + SV    +   +L+ IS+A+  I+DM TQIASAAEEQS V  DIN
Sbjct: 610 RDVVRVMEDSQSRTDESVQHAAKAAEALETISQAVSVINDMNTQIASAAEEQSAVAEDIN 669

Query: 597 VNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
            N  ++ +V++++A  A +S   +  L  +A++  + I++FK+
Sbjct: 670 RNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712