Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  229 bits (584), Expect = 3e-64
 Identities = 144/404 (35%), Positives = 223/404 (55%), Gaps = 23/404 (5%)

Query: 236 NIAAKDHSLFQLSMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGI 295
           +I++ + SL QL     D +  AE    T  ++V ++           + +V IG  L I
Sbjct: 240 SISSAEKSLVQLKAQSMDAISDAESATVTISIVVFIL-----------ITLVLIGFTLAI 288

Query: 296 LLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVD 355
           +  +           +  +  I++A++ I E   DLT R D +  DE+G +A  FN  V+
Sbjct: 289 IRSI-----------MEPVQRISDAISRI-EATKDLTLRCDTKVDDEIGQIARHFNSMVE 336

Query: 356 RLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIAS 415
               +++ V      +       + ++ +AS+ +  Q +E  MVATA+TEM +   EIAS
Sbjct: 337 SFQSLIREVLTSVEVVNHSCQELSENSMRASEGVGRQLNETDMVATAITEMGATIDEIAS 396

Query: 416 NAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILST 475
           N E  A+ A  +    + G   ++ + + I  LA +LT + +++SELE  +  I ++L  
Sbjct: 397 NTELAAERAGNTHDNAQQGQVGVEHTIEKIQALAAQLTDSAQVVSELEKDSETIGSVLDV 456

Query: 476 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKV 535
           IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT  STEEI   I  LQ  
Sbjct: 457 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSR 516

Query: 536 TTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADI 595
           T + V +M  + +    S       GA L+ I+  +  I DM+TQIA+A EEQS+V +++
Sbjct: 517 TRSIVQLMEATQRQGIESADQAASAGALLEQINADVTNIMDMSTQIAAAIEEQSMVASEV 576

Query: 596 NVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           N N   +R+++ + A+ A ++ + +  + A  Q L + +S FK+
Sbjct: 577 NKNVVVIRDIAAESAQAADENAKASDDVKARTQVLYQAVSLFKI 620