Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  230 bits (587), Expect = 1e-64
 Identities = 165/468 (35%), Positives = 256/468 (54%), Gaps = 30/468 (6%)

Query: 193 IEVPGKGYAILVNQKGKIVAH-PTQDLILKPTEEMSAQL---TISKLNIAAKDHSLFQLS 248
           I+    GY +L +    ++A+  + D +     ++++Q+    + KL   A    + + S
Sbjct: 87  IQYGESGYFLLFDADHTLLANGASPDQLGIKASKLTSQMGGNALDKLLDKAMASGIAKAS 146

Query: 249 MDGRDKVLMAEEVANTD------WLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMA-- 300
           M+ R+ +   +E A  +      W   +V    + +  +ND  +  +   LGI+L+++  
Sbjct: 147 MEMRNPITGEQEEALMEARTFPAWQWTLVTTSYMSD--VNDTTISVMYNYLGIMLLISVP 204

Query: 301 -----LLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVD 355
                L+ +  ++  LN+     +A+ DIAEG+GDLT+RL  + +DEV  LA  FN FV 
Sbjct: 205 IFAFFLILNHSISSPLNQA---IDAMKDIAEGEGDLTKRLPTQGKDEVVALAIAFNNFVG 261

Query: 356 RLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIAS 415
           ++++MV +++ V   L Q AD    +  +++  +     E + VATA+ +M S T E+AS
Sbjct: 262 KINKMVADLQPVGHDLNQDADRLFNAVAESNASVDHLHQETSSVATAINQMLSTTHEMAS 321

Query: 416 NAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILST 475
           + +  A  A    Q  +D   QM  + ++  +L QEL  A  I   L V + +I +IL  
Sbjct: 322 STQQAADAANSVKQQAQDSKQQMDGTVENTHKLVQELKNAEGITQHLGVSSEQIGSILDV 381

Query: 476 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKV 535
           IRGIA+QTNLLALNAAIEAARAG  GRGFAVVADEVR L+ RT  ST EIQ  I  +Q  
Sbjct: 382 IRGIADQTNLLALNAAIEAARAGAHGRGFAVVADEVRALANRTQDSTNEIQKIITDIQ-- 439

Query: 536 TTTAVSVMTESHKLVETSVADVNQ----TGASLQAISEAIQQISDMATQIASAAEEQSLV 591
               V+ +  S+   +T   ++ Q     G SL  I E I  ISDM TQ+ASA EEQSLV
Sbjct: 440 --NGVANVMHSNSDTQTQSVELQQQAQAVGESLNTILELIAHISDMNTQLASATEEQSLV 497

Query: 592 TADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           T +IN N  S+ E+S+   +  + +   A+SL  ++Q   K + +FK+
Sbjct: 498 TEEINRNICSITELSEVSVKANESNRMAAESLRQISQTSAKILGQFKV 545