Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  223 bits (569), Expect = 2e-62
 Identities = 133/346 (38%), Positives = 206/346 (59%), Gaps = 3/346 (0%)

Query: 295 ILLVMALLTSWFVARQL-NELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKF 353
           I +V+A+L S  V R L N L  + NAL  +A G+  LT +LD    DE   L+   N+ 
Sbjct: 331 IAIVVAVLVSIAVIRPLKNSLDKVNNALNILASGN--LTHKLDDSGHDEFAELSRNCNRL 388

Query: 354 VDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEI 413
           VD L  +++ + + S  L   A+  +A   Q +  I+ Q++++  VATA T+++S+  ++
Sbjct: 389 VDSLRTLIQGILDRSNQLAAAAEETSAITAQTTAGIQEQKNQVDQVATATTQLSSSAMQV 448

Query: 414 ASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTIL 473
           +++A+       Q+ +  +   A   ++K++I  LA E+  A ++I+++   +  I +IL
Sbjct: 449 STSADEALNQIRQADEEAQHMRAIADENKRTILALADEVAKAGQVINKVHSDSASIGSIL 508

Query: 474 STIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQ 533
             IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT  ST+EIQ  I  LQ
Sbjct: 509 DVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQDSTQEIQQMIQVLQ 568

Query: 534 KVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTA 593
           + T  AVSVM    +   + V    Q   +L++IS A+    D  T IA+AA+EQ+LV+ 
Sbjct: 569 QGTQEAVSVMELGRQQANSCVEKTEQANVALESISNAVHYAHDSGTHIANAAQEQNLVSQ 628

Query: 594 DINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
            ++   E +  +S++ A  A Q+ Q +  +  +A+EL   +  FK+
Sbjct: 629 QVSEKLEHIAAISEETATGADQTAQSSHQVAQLAEELQASVGEFKV 674