Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  277 bits (708), Expect = 1e-78
 Identities = 199/647 (30%), Positives = 326/647 (50%), Gaps = 34/647 (5%)

Query: 13  LSLKRKMVFSVVVAIAVTAAAL-VAAGYQTFEKDSWRAIESESRNTLQA----------- 60
           L++K+K++ +V VA+ ++   + V +     E    R + SE  NTLQA           
Sbjct: 6   LTIKQKILLTVTVAVLLSTVLVGVLSQRSAKEVVEQRMLTSELPNTLQAIRNKVEMDIAT 65

Query: 61  ---HAKGIGDWFLGKQLALKGLREEIERN--PQLELVPHLRQTLQSGSFGLSYYGNEQGE 115
               A+ +    + KQ  ++G   E E     QL+ V    + +Q+     SY   +   
Sbjct: 66  LMNAAEQLASSKMLKQWLVEGRPAETEPLVIAQLKDVQQQYKLVQA-----SYADRQTAA 120

Query: 116 MFRQDPSLN--TADYDPRVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQL 173
            + QD  L   T D D    GW+   K +G       +     +  +    +    +G L
Sbjct: 121 YYTQDGFLRILTPDQD----GWFFNYKNSGTERMLNVFTEANGEVKLFINYQQPNDRG-L 175

Query: 174 IGVAASNLALDKLIKDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTIS 233
           +G+A S   LD +++ + + ++   G+  LV+ KG +  H     I K +        ++
Sbjct: 176 VGLAKS---LDDMVRLLKSFKIEDTGFVYLVDAKGDVKLHSDTSQIGKASLSSLYGGNVT 232

Query: 234 KLNIAAKDHSLFQLSMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGL 293
           +  +   D  L Q  +DG   ++ +  + + DW LV  + +  +   L +    QI +  
Sbjct: 233 RELLNKGDFGLTQTELDGETLLVASSYIPSMDWYLVAQVPRAEVFALLEESAY-QILVWT 291

Query: 294 GILLVMALLTSWFVARQLNE-LGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNK 352
            ++    +  S FV+  +++ +  +A+ L DI +G+GDL +RL V   DE+  LA  FN 
Sbjct: 292 VLIAAAFIGLSTFVSASVSQPIAKVADMLQDIGQGEGDLRQRLPVEGNDELAQLAKGFNS 351

Query: 353 FVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAE 412
           F++++   +  V + SV L+  A   A  A Q     + Q+D+  MV TA+ EM +   E
Sbjct: 352 FIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQTQDDSQLQKDQTMMVVTAINEMGATVHE 411

Query: 413 IASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTI 472
           IA NA   A NA  +     +G   + +++ +I+QL+Q++     +I  L  H   I +I
Sbjct: 412 IAGNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQDVEQVGNVIESLATHTTSIGSI 471

Query: 473 LSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGL 532
           L  IR +++QTNLLALNAAIEAARAGE GRGFAVVA+EVR L+ RT AST+E+Q  I  L
Sbjct: 472 LDVIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEEVRNLASRTAASTDEVQKMIDNL 531

Query: 533 QKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVT 592
           Q     AV  MT+S    +  V  V++   +L  IS+ I  I+DM  Q+A+A EEQS V 
Sbjct: 532 QSEAARAVEAMTQSKSRSQEGVQAVDEASHTLTEISQQIGAITDMNIQVAAATEEQSTVV 591

Query: 593 ADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
            DIN N   + E++ + +E +Q   Q ++SL+ +A  L+  ++ FK+
Sbjct: 592 EDINRNVTEISEITQRTSETSQAVAQASQSLNQLAHRLDTLVAGFKV 638