Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 695 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  216 bits (549), Expect = 4e-60
 Identities = 173/609 (28%), Positives = 288/609 (47%), Gaps = 60/609 (9%)

Query: 80  REEIERNPQLELVPHLRQTLQSGSFGLSYYGNEQG--EMFRQDPSLNTADYDPRVRGWYK 137
           R +++ N Q      +  T  + ++   + G  +G   MF +D     A YDPR R WYK
Sbjct: 94  RADMQPNEQKLFDIFMHMTKGNPAYDGVFLGTAEGGFNMFPEDSL--PAGYDPRKRPWYK 151

Query: 138 EAKAAGK-PITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLAIEVP 196
           EA  +G+  I ++ Y+S T   +   +A+    Q +++G    ++ L  L +   A+ + 
Sbjct: 152 EALGSGEDSIISKAYMSTTRVPVSSVVAKVFDAQRRVVGAIGIDINLSTLTRVTSALHIG 211

Query: 197 GKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMDGRDKVL 256
             GY +LV   G I++ P  +      + ++   T +   I      +F+ S+DG+D++ 
Sbjct: 212 QTGYVMLVEDTGIIISDPKHEQF--AFKNITETGTPAFTRIMGMKRGMFEDSLDGKDRIF 269

Query: 257 MAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVARQLNE-LG 315
                    W LV V+D   +      ++   + IG GI LV+ L  +WF+AR + E + 
Sbjct: 270 TV-VTGYLGWKLVSVIDADEVYGKARSLVFTIVSIGFGIALVL-LAVAWFIARSVAEPIR 327

Query: 316 NIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMV-----------KNV 364
            +  A  ++A G+ +     +     E+  L    N  V +L  +V           +  
Sbjct: 328 MLVEASGEVARGNFNALPS-ERHFSGELLTLRGSLNDMVTQLGNLVSTAETKTQEAEEQA 386

Query: 365 REVSVALTQGADHAAA---------------------SATQASKRIRTQQDEITM----- 398
           R+   ALTQ  +   A                       T AS+ + +Q  E T      
Sbjct: 387 RKAGEALTQAEEARRAGEVARREGIMQTAGRLESIVDQITSASQELASQIGEATRGSDIQ 446

Query: 399 ------VATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSI---DQLA 449
                  ATA+ EM ++  E+ASNA   A++A  + +  E G   ++    SI   ++ A
Sbjct: 447 RARTTEAATAMEEMNASVLEVASNASRAAESAEHARKEAEGGGGIVRDVVSSIGEVNRFA 506

Query: 450 QELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 509
            E+ G+   + +L   A  I  I++ I  IA+QTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 507 AEMGGS---LDDLGKQAEGIGHIMTVITDIADQTNLLALNAAIEAARAGEAGRGFAVVAD 563

Query: 510 EVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISE 569
           EVR L+++T  +T+E+   I  +Q+ T   +  M+ +  ++  S    ++ G +L  I  
Sbjct: 564 EVRKLAEKTMTATKEVGDAIGAIQRGTRNNIDGMSRASGVISQSTDLASRAGDALGRIVN 623

Query: 570 AIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQE 629
            ++  +D    IA+A+EEQS  + +IN +TE V  ++ ++AE   QS      L  +A +
Sbjct: 624 IVESTADQVRSIATASEEQSAASEEINRSTEEVNRIASEMAEAMSQSAVAVNELARLAAD 683

Query: 630 LNKEISRFK 638
           L   I + K
Sbjct: 684 LQDIIRQLK 692