Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  474 bits (1220), Expect = e-138
 Identities = 265/628 (42%), Positives = 391/628 (62%), Gaps = 11/628 (1%)

Query: 14  SLKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGDWFLGKQ 73
           SLK+K++ SVV+A+++  + L    Y + +    +    + +   +  A+ I +W  G+Q
Sbjct: 5   SLKQKILISVVIALSLVISLLSWQSYSSQKSLLLQNSLEQVQRLGEQQAERIQEWLAGRQ 64

Query: 74  LALKGLREEIERNPQLELVPHLRQTLQSGSFGLSYYGNEQGEMFRQDPSLNTADYDPRVR 133
             +  L  ++E N     +  L+Q   SG F L+YYG E G+M   DPS++   YDPR R
Sbjct: 65  DIVGALASKVEDNS----LSALQQAQASGRFQLTYYGTETGQMLDSDPSIDRTGYDPRTR 120

Query: 134 GWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLAI 193
            WYK+A      I T+PYV V    LVVT+A+         GV   +L++  L++ V  +
Sbjct: 121 PWYKQAMNERGLILTKPYVDVAYNVLVVTMAQATSQ-----GVVGGDLSIASLVESVNRM 175

Query: 194 EVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMD--G 251
            +P  GYAI++++ G ++A+      +KP  ++   L       + +  +L  +  +  G
Sbjct: 176 TLPANGYAIMMHKDGTVIAYKDASKAMKPVGQIDNDLNHDLPQQSRQAGTLLPMYFENEG 235

Query: 252 RDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVARQL 311
           RDK++   ++ NTDW LV+V+DK  LE PL D+L+ Q G+   +LL+  L  SW V   L
Sbjct: 236 RDKLVWGVDIPNTDWELVIVLDKETLEAPLTDLLLTQFGLSAVVLLLSVLAISWLVNLLL 295

Query: 312 NELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVAL 371
             LG ++ ALA IA+G+GDLT+R++V +QDEVG+LAD FN+FV   HQ++ ++R+++  L
Sbjct: 296 GPLGRVSQALARIADGNGDLTQRIEVDTQDEVGVLADSFNRFVGSQHQLISHIRQLASEL 355

Query: 372 TQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLG 431
              A+ +  +   A   ++ QQ E+ MVATAVTEMASAT EIA+NAENTA  A QS    
Sbjct: 356 DADAERSLKTNHIAVAELQRQQQEVAMVATAVTEMASATNEIAANAENTATAAQQSAASS 415

Query: 432 EDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAA 491
             G   + +++ SI+ LA E+  A  +I +L  HA  IS+IL+TI+GIAEQTNLLALNAA
Sbjct: 416 FQGKELVNKTRSSINSLADEVAQATDVIEDLSRHAQSISSILATIQGIAEQTNLLALNAA 475

Query: 492 IEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVE 551
           IEAARAGEQGRGFAVVADEVRVLS+RT  ST+E+   I  LQ+ T  AVS+M  S  L  
Sbjct: 476 IEAARAGEQGRGFAVVADEVRVLSRRTQDSTQEVHATIETLQRTTAKAVSLMESSQMLAG 535

Query: 552 TSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAE 611
            SV D N    +L+ I++A+  ISDMA QIA+AAEEQ+ VT +I  NT ++++V+D++ E
Sbjct: 536 NSVEDANAAAKALEEITQAVNVISDMAGQIATAAEEQTQVTGEITQNTVAIKDVTDEITE 595

Query: 612 EAQQSVQQAKSLHAMAQELNKEISRFKL 639
            A+  + QA++L A A +LN +++ F L
Sbjct: 596 AAKSDLTQAQALKARANDLNAQVATFIL 623