Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  219 bits (557), Expect = 3e-61
 Identities = 155/490 (31%), Positives = 246/490 (50%), Gaps = 45/490 (9%)

Query: 155 TMQTLVVTLAEPV-RYQGQLIGVAASNLALDKLIKDVLAIEVPGKGYAILVNQKGKIVAH 213
           T+  L VT+A+P+  Y  + I    S +   + I  +            +V+ +GK++A 
Sbjct: 46  TVANLQVTMAQPIFTYDYEQIRAVLSVMLKSEQIYQIT-----------VVDHRGKLLAE 94

Query: 214 PTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMDGRDKVLMAEEVANTDWLLVMVMD 273
             Q  I+  ++  + +L  S                          +  N    L +   
Sbjct: 95  DKQAEIVAASDLQTRELQFS--------------------------DQGNPTGRLTIAFS 128

Query: 274 KGVLEQPLNDMLMVQIGIGLGILLVMA--LLTSWFVARQL--NELGNIANALADIAEGDG 329
              ++  L+D+L+   G  L  LL++A  LL  + + ++L  + L  +  AL +IA GDG
Sbjct: 129 TLPVKAQLSDLLL---GYFLQALLILAGSLLVIFIILKRLVISPLDKVVAALEEIANGDG 185

Query: 330 DLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRI 389
           DL+ RL V S+DE+G LA+ FN FV+++H  +  V E S  L   A      +   ++R+
Sbjct: 186 DLSHRLPVESEDEIGKLANAFNGFVEQIHGTITRVHETSGLLLGDAKALGTLSQSNNQRV 245

Query: 390 RTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLA 449
           + Q  E     TAVT+++++  E+A NA+ TA  ATQ+ +  +DG  Q         QLA
Sbjct: 246 QAQLKETEAAVTAVTQLSASANEVAINAKRTADAATQADRAVDDGQRQFDSGLAITRQLA 305

Query: 450 QELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 509
            EL  + + +S+L+     I  ++  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 306 GELARSAQSVSQLQQETQRIDEVVVVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 365

Query: 510 EVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISE 569
           EVR L+ RT  +T EIQ  I  +Q      V+VM  S  L    V    +    L  +++
Sbjct: 366 EVRSLASRTQQATGEIQKMIQQVQSRVAETVNVMQSSQTLSNQGVNRSEEIKLVLSKVTD 425

Query: 570 AIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQE 629
            +  IS+M  +++ AA+EQ+ VT  I+     +  VS   + +++   Q ++ L    + 
Sbjct: 426 LVSNISNMNIEVSHAAQEQTCVTEAISRTLNDLANVSGSASLDSEHLAQSSERLFHQGER 485

Query: 630 LNKEISRFKL 639
           L   ++ F+L
Sbjct: 486 LRTLVTSFRL 495