Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 545 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  216 bits (551), Expect = 2e-60
 Identities = 150/459 (32%), Positives = 243/459 (52%), Gaps = 20/459 (4%)

Query: 197 GKGYAILVNQKGKIVAHPTQ-DLI---------LKPTEEMSAQLTISKLNIAAK-DHSLF 245
           G GY I+++   +I+AH  + DLI            T  ++  L +++ N     ++ + 
Sbjct: 91  GVGYFIVIDDNNQILAHGERSDLIGTSALNFKLQNGTNPLATMLPLARQNGKTMLEYPIA 150

Query: 246 Q-LSMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLN----DMLMVQIGIGLGILLVMA 300
             +S +  DK++ A       W L+       ++Q L     D L++   I + I     
Sbjct: 151 NPVSKNIEDKLVEARYYPEWGWTLITGAYLSDVKQSLKAVIIDYLIIMFLISVPIFAFFL 210

Query: 301 LLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQM 360
           +L     +     L +  +AL DIA+G+GDL++RL  + +DEV  LA  FN F  ++  M
Sbjct: 211 VLNHSITS----PLNDAIDALEDIAQGEGDLSQRLSTQGKDEVAHLAHAFNLFAQKIGDM 266

Query: 361 VKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENT 420
           V +++ +  +L   A     +  ++++       E   VATAV +M S T E+ASN +  
Sbjct: 267 VGHLQPLGQSLDNDAKQLMLAVEESNQSAEHIHRETGSVATAVNQMLSTTHEMASNTQQA 326

Query: 421 AKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIA 480
           A  A       +   A +  + +  ++L QEL  +  I  +L   + +I +IL  IR IA
Sbjct: 327 ADAANSVKNQAQQSQAVIDDTVRDTEKLVQELRASEVITQKLGQSSAQIGSILDVIRSIA 386

Query: 481 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAV 540
           EQTNLLALNAAIEAARAG  GRGFAVVADEVR L+ RT  ST EIQ  I+ +Q    + +
Sbjct: 387 EQTNLLALNAAIEAARAGSHGRGFAVVADEVRALANRTQDSTNEIQKIISDIQMGVNSVM 446

Query: 541 SVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTE 600
              +++    +   A   + G ++ AI + I  ISDM TQ+ASA EEQSLVT +IN N  
Sbjct: 447 KSNSQTQTQSDELQAKAREAGNAMAAILQLIAHISDMNTQLASATEEQSLVTEEINRNIC 506

Query: 601 SVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           ++ E+++   +  + + + A+SL  ++Q+++  + +FK+
Sbjct: 507 NISELTEVSVKANEGNSRAAQSLQDISQDMSHTLGQFKI 545