Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  238 bits (608), Expect = 5e-67
 Identities = 183/671 (27%), Positives = 317/671 (47%), Gaps = 47/671 (7%)

Query: 10  FMRLSLKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGDWF 69
           +++ SL  ++V ++V A+AV    + A        ++ + ++++    +   A  IG +F
Sbjct: 3   YIKRSLSLQLVVTIVGALAVLLTLVAALLVNKESNNTRKQVDADISALVALKANEIGGYF 62

Query: 70  LGKQLALKGLREE----------------IERNPQLE-LVPHLR---------QTLQSGS 103
           + K   +  +  E                +  + Q + ++ + R         +++  GS
Sbjct: 63  VAKGQVIHSVFAEPGLINWFSQYHARGSNLANDQQYQDIIRYFRSFSDRDTDVKSVFFGS 122

Query: 104 FGLSYYGNEQGEMFRQDPSLNTADYDPRVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTL 163
                Y +  G  F  DP+     Y    R W++EA         +P V     ++  T+
Sbjct: 123 ANTFEYFDLNGR-FDGDPN-----YYTNKRPWWQEAIDQRGLFVGDPAVDANDGSISATV 176

Query: 164 AEPVR-YQGQLIGVAASNLALDKLIKDVLA-IEVPGKGYAILVNQKGKIVAHPTQDLILK 221
             PV    G+LIG+   ++ +D + K +LA I+    G A L+  +GK+V  P       
Sbjct: 177 KTPVYGANGELIGIGGMDILIDTIGKTLLAPIKYRNYGQAFLMTDEGKLVYFPGFSDKFP 236

Query: 222 P---TEEMSAQL------TISKLNIAAKDHSLFQLSMDGRDK----VLMAEEVANTDWLL 268
           P     ++ +Q       T  +  +  +     +++ +G  +    V +  +     W L
Sbjct: 237 PGSLANQIDSQFKDTSGFTALRQQMQREAQGFAEVTFNGVPQRVTFVSVGGDYPKQKWHL 296

Query: 269 VMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGD 328
             ++   V+E P+ +       + LGI+L++ +     +     +L  + +A+ DIAEGD
Sbjct: 297 AFMLPHEVIEAPVTEAFWNACFVALGIMLLVGITVWLMLLPFRRQLSKLLDAMEDIAEGD 356

Query: 329 GDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKR 388
            DL++R+ +  +DE+G L D FN+F +++ QM+ + R ++  +  G   A      A   
Sbjct: 357 SDLSQRILMEREDELGKLGDAFNRFAEKVQQMLLHTRNLTQEVGTGVMDARQVCDLAVSS 416

Query: 389 IRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQL 448
           + +Q+ +I  VATA T+MA  + E+A +A+     A ++     DG   + ++ + +  L
Sbjct: 417 VSSQKQQIDSVATAATQMAQTSQEMAISAQRANDFAEKAQTQAHDGTQIVSRATEGMKAL 476

Query: 449 AQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVA 508
           + ++  A ++I EL   + +I  +LS IR IA+QTNLLALNAAIEAARAGEQGRGFAVVA
Sbjct: 477 SVQVIEAAKVIKELRSSSEQIGEVLSVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVA 536

Query: 509 DEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAIS 568
           DEVR L+ RT  ST  IQ  I  LQ+    A  VM    +          Q   +L  I+
Sbjct: 537 DEVRTLASRTQDSTANIQGIIQTLQQSALQAEQVMESGVEQARVGQDLTTQVEQALSDIA 596

Query: 569 EAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQ 628
            AI  I     +I  A  +Q++V  ++  N  SVR +SDQ    +Q   Q  +       
Sbjct: 597 SAIVSIQQQTVEITVAIGQQAVVAEEVAQNVVSVRGLSDQSLLSSQDLSQSLQGFEQATH 656

Query: 629 ELNKEISRFKL 639
           EL + I +FK+
Sbjct: 657 ELTRNIGQFKI 667