Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  566 bits (1458), Expect = e-165
 Identities = 309/630 (49%), Positives = 420/630 (66%), Gaps = 1/630 (0%)

Query: 11  MRLSLKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGDWFL 70
           MR +LK +++FS + A+ +T A LV+        ++    + E        A+GIG W  
Sbjct: 1   MRSTLKTRLLFSSLFAVLITVAVLVSISSYFIRNNALENTQHEIDQLANTFAEGIGLWMQ 60

Query: 71  GKQLALKGLREEIERNPQLELVPHLRQTLQSGSFGLSYYGNEQGEMFRQDPSLNTADYDP 130
            +++A+  L++ IE +P +++ P+L Q      F L+Y+G+EQG M+RQDP+LN A+YDP
Sbjct: 61  DRKMAITSLKKTIEADPSVQITPYLLQAHNGMGFALTYFGDEQGNMYRQDPALNVANYDP 120

Query: 131 RVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDV 190
           R+R WY +AKAA   + T PYVS T++  VVT+AEPV   G L GVAA+NL +D+L   V
Sbjct: 121 RIRPWYMDAKAANAIVMTAPYVSATLKKQVVTIAEPVTVSGSLFGVAAANLTIDQLTDAV 180

Query: 191 LAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSMD 250
             ++VPGKGY I+V++ G I++HP   L  +   ++    T S L+  A  ++L +  +D
Sbjct: 181 QRLQVPGKGYTIMVDKTGLIISHPKSQLNNEQLNKIDNSFTPSWLSQRANANTLEERELD 240

Query: 251 GRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVARQ 310
           G  +++    V +TDW LV VM+K  +      +      +G G+L++  L+       Q
Sbjct: 241 GETQLIYVAAVPSTDWELVFVMNKDEIMSQATTLAWWMSAVGAGLLVIFGLVLVAIFKIQ 300

Query: 311 LNELGNIANALADIAEGDGDLTRRLDV-RSQDEVGLLADKFNKFVDRLHQMVKNVREVSV 369
             +L  +A AL DIAEGDGDLT R+    S DE+G+LA  FN+FV+RLH M+  + +++ 
Sbjct: 301 FKDLERVALALNDIAEGDGDLTVRIHTANSHDEIGILASGFNRFVERLHGMISRMHKIAG 360

Query: 370 ALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQ 429
            L   A  ++ASAT  S+RI  QQDE+TMVATAVTEMASAT EIASNAE+TA+ A  +V 
Sbjct: 361 QLEYQAQGSSASATDNSQRIAVQQDEVTMVATAVTEMASATEEIASNAEHTAQTAQDAVG 420

Query: 430 LGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALN 489
           L   G  Q+ QS+QSI  LA E+  A RIISEL  H+ +I++IL TI GIAEQTNLLALN
Sbjct: 421 LSNHGQKQVMQSQQSIRNLANEVETAGRIISELNEHSQKINSILLTISGIAEQTNLLALN 480

Query: 490 AAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKL 549
           AAIEAARAGEQGRGFAVVADEVRVLSQRTH+ST+EIQ  I  LQ+    AV  MT+SH +
Sbjct: 481 AAIEAARAGEQGRGFAVVADEVRVLSQRTHSSTQEIQAMIETLQQTAGKAVKSMTQSHDM 540

Query: 550 VETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQL 609
            ETSVAD N    SL  IS+AI +ISDMA+QIA+AAEEQ+ VT++IN NTES+REVS+ L
Sbjct: 541 AETSVADANSASESLLQISKAINEISDMASQIATAAEEQTSVTSEINRNTESIREVSENL 600

Query: 610 AEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           + EAQ S+ QA+ L  +A  L +E+ RFKL
Sbjct: 601 SIEAQSSMVQAQELAHLAASLQQEVGRFKL 630