Pairwise Alignments
Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3
Score = 265 bits (678), Expect = 4e-75
Identities = 198/650 (30%), Positives = 324/650 (49%), Gaps = 30/650 (4%)
Query: 8 VLFMRLSLKRKMVFSVVVAIAVTAAALVAAGYQTFEKD--SWRAIESES-------RNTL 58
++ L++K+K++ +V A+ ++ LV Q K R + SE RN +
Sbjct: 1 MILNNLTIKQKILLTVTFAVLLSTI-LVGVLSQRSAKSVVQQRMLGSEMPSLMMQIRNKI 59
Query: 59 QAHAKGI---GDWFLGKQLALKGLREEIERNPQLELVPHLRQ-TLQSGSFGLSYYGNEQG 114
+ + + ++ L+ L + + ++V L+ T Q SY +
Sbjct: 60 ELDISSLMNAAEQLASSRMLLQWLENGRPQEQEPQVVAQLKDITRQYHLAQASYADRQTA 119
Query: 115 EMFRQDPSLNTADYDPRVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLI 174
+ QD L P GW+ + +G+ + + + + +G L+
Sbjct: 120 AYYTQDGFLRVLT--PAQDGWFFGYRDSGQERMLNVFTEANGEVKLFINYQQPNGRG-LV 176
Query: 175 GVAASNLALDKLIKDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPT-EEMSAQLTIS 233
G+A S LD +++ + + ++ G+ LV+ KG++ HP I K + + + + IS
Sbjct: 177 GLAKS---LDDMVRLLGSFKIEETGFVYLVDAKGEVKLHPDASQIGKSSLKSLYSGANIS 233
Query: 234 KLNIAAKDHSLFQLSMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLND----MLMVQI 289
L + D +L + G + + + + + DW LV + + + L D +L+ +
Sbjct: 234 SL-LNRSDFNLIDTQIQGENTFVASSYIPSMDWYLVAQVPEAEVFALLTDAAYQILIWTL 292
Query: 290 GIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADK 349
I G ++ +A++ + V+R + + +A DI EG+GDL +RL V+ +DE+ LA
Sbjct: 293 IIAAGFIM-LAIVVAGSVSRPIAQ---VAAMFRDIGEGEGDLRQRLPVKGEDEIAQLAQG 348
Query: 350 FNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASA 409
FN F+ ++ V V + S L A + A Q + Q+D MV TA+ EM +
Sbjct: 349 FNSFISKIQDSVIEVAQTSEQLGFSAKDVSNQAQQTLEDSHEQKDRTMMVVTAINEMGAT 408
Query: 410 TAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEI 469
EIASNA A A + G + +++ +I+QL+Q++ +I L H I
Sbjct: 409 VNEIASNAAQAAVAAKDADTESNSGQVVVTRARDTINQLSQDVEQVGEVIESLATHTKSI 468
Query: 470 STILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKI 529
IL IR I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT AST E+Q I
Sbjct: 469 GGILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTNEVQGMI 528
Query: 530 AGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQS 589
LQ + AV+ M +S VA V++ SL IS+ I ISDM Q+A+A EEQS
Sbjct: 529 DKLQSEASRAVNAMAQSRARSHEGVAAVDEASQSLVGISDRIGLISDMNIQVAAATEEQS 588
Query: 590 LVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
V DIN N + E++ + A AQ + Q + +L+ +A L+ +++FK+
Sbjct: 589 TVVEDINRNVTEINEITQRTASTAQAAAQASLALNQLAHRLDTLVAKFKV 638