Pairwise Alignments

Query, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

Subject, 749 a.a., Arginine/lysine/ornithine decarboxylases from Pseudomonas stutzeri RCH2

 Score =  360 bits (923), Expect = e-103
 Identities = 230/664 (34%), Positives = 329/664 (49%), Gaps = 37/664 (5%)

Query: 57  KLPIFVA---VCCEDQFPDDFCADIT---GVFELCDAKVEFYGKQVETAVRRYQESLLPP 110
           +LPIF     V  E+  P +  AD+    G+  L +  V F  +QV  A R Y + LLPP
Sbjct: 92  RLPIFALGEQVTIENA-PAEAMADLNELRGLLYLYEDTVPFLARQVARAARSYLDDLLPP 150

Query: 111 FFGTLKKYVDMGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETLFRSDMCNADVRLGDLL 170
           FF  L ++    N ++  PGH GG  +RK PVG+ F  FFGE   RSD+  +   LG LL
Sbjct: 151 FFSALVRHTGESNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLL 210

Query: 171 IHEGAPHDAQAYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRNNHKSNHHG 230
            H G    A+A AA+ + AD T+FV+NGTS +NK+V ++++   DLVL DRN HKS  H 
Sbjct: 211 DHTGPVAAAEARAARNFGADHTFFVINGTSTANKIVWHSMVARDDLVLVDRNCHKSILH- 269

Query: 231 ALIQAGATPVYLETARNPFGFIGGIDTHCFNESYLRDAVRNVDPSRAEAKRPFRLAIIQL 290
           A+I  GA P+Y+   RN  G IG I    F    ++  +   +P         +LA++  
Sbjct: 270 AIIMTGAIPLYMSPTRNELGIIGPIPLEEFTRESIQAKIA-ANPLARGRPPKVKLAVVTN 328

Query: 291 GTYDGTIYNARQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVT 350
            TYDG  YNA  +   +    + + FD AW  Y  F           +D + + P +  T
Sbjct: 329 STYDGLCYNANLIKRTLADNVEVLHFDEAWYAYAAFHEFYD--GRYGMDTREQGPLVFTT 386

Query: 351 QSVHKQQAGFSQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAK 410
            S HK  A FSQ S IH  D     Q R  +  RFN AFM+H STSP Y + A+LDV + 
Sbjct: 387 HSTHKLLAAFSQASMIHVLD----SQTRQLDRDRFNEAFMMHISTSPQYGILASLDVASA 442

Query: 411 MHEGDSGRYLWREAVKTGIEARKLLMKKCKYIKP-------FIPPMIEGKPWQSHPTEQI 463
           M EG +GR L +E     +  R+ L    ++I         + PP+++G      P    
Sbjct: 443 MMEGPAGRSLIQETFDEALSFRRALANLRQHIDADDWWFSIWQPPLVDGAEALVTPD--- 499

Query: 464 ADDLRFFEFEPGQKWHAFEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILANF 523
                 +  EP   WH F         +DP K  L TPG+   +G     GIPA +++ F
Sbjct: 500 ------WLLEPTADWHGFGEIADDYVLLDPIKVTLVTPGL-TASGALGKSGIPAAVVSKF 552

Query: 524 LRENNIIPEKCDLNSILFLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRAN 583
           L E  ++ EK  L S+L L +      K   L+ ++  F+R  + + PL E LP++ R  
Sbjct: 553 LWERGLVVEKTGLYSMLVLFSMGITKGKWSTLLTELLEFKRHYDANIPLVEALPSIARKG 612

Query: 584 RERYKGYTIRQLCQEMHDLYVSHDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGQVELV 643
              Y G  +R LC  +H  Y  +   +  + M+ A   P   M P +A    VRG+VE V
Sbjct: 613 AATYAGMGLRDLCDALHACYCENATARAMRRMYTA--LPEPAMTPAQAYDKLVRGEVEAV 670

Query: 644 PLREVEGRIAAEGALPYPPGVLCVVPGEIWGG---SVQRYFLALEEGINLLPGFAPELQG 700
           P+  +EGRIAA   +PYPPG+  ++PGE + G   S+  Y     +     PGF  ++ G
Sbjct: 671 PIEALEGRIAAVMLVPYPPGIPLIMPGERFTGETRSILDYLRFARDFAERFPGFDADVHG 730

Query: 701 VYLE 704
           +  E
Sbjct: 731 LQHE 734