Pairwise Alignments

Query, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

Subject, 947 a.a., Probable amino acid decarboxylase from Mycobacterium tuberculosis H37Rv

 Score =  139 bits (349), Expect = 9e-37
 Identities = 160/653 (24%), Positives = 256/653 (39%), Gaps = 116/653 (17%)

Query: 110 PFFGTLKKYVDMGNSTF-ACPGHQGGQFFRK---HPVGRQFFDFFGETLFRSDMCNADVR 165
           PFF  L+ Y       F A P  +G   F     H +G    +F+G  +F ++       
Sbjct: 291 PFFDALRAYAAAPVGQFHALPVARGASIFNSKSLHDMG----EFYGRNIFMAETSTTSGG 346

Query: 166 LGDLLIHEGAPHDAQAYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRNNHK 225
           L  LL   G    A   AA  +NA++TYFV NGTS +NK+V  AL  PGD+VL DRN HK
Sbjct: 347 LDSLLDPHGNIKTAMDKAAVTWNANQTYFVTNGTSTANKIVVQALTRPGDIVLIDRNCHK 406

Query: 226 SNHHGALIQAGATPVYLETARNP-FGFIGGIDTHCFNESYLRDAVRNVDPSRAEAKRPFR 284
           S+H+G L+ AGA P+YL+    P +   G +      ++ L       D   A      R
Sbjct: 407 SHHYG-LVLAGAYPMYLDAYPLPQYAIYGAVPLRTIKQALL-------DLEAAGQLHRVR 458

Query: 285 LAIIQLGTYDGTIYNARQVVDRI----GHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDL 340
           + ++   T+DG +YN R+V++ +      +C   L+D AW  +   +P  +  + ++   
Sbjct: 459 MLLLTNCTFDGVVYNPRRVMEEVLAIKPDIC--FLWDEAWYAFATAVPWARQRTAMIAAE 516

Query: 341 KPE----------------------------------DPG-----IIVTQSVHKQQAGFS 361
           + E                                  DP      +  T S HK  +   
Sbjct: 517 RLEQMLSTAEYAEEYRNWCASMDGVDRSEWVDHRLLPDPNRARVRVYATHSTHKSLSALR 576

Query: 362 QTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYLW 421
           Q S IH +D   K   R      F  AF+ H STSP   L A+LD+ A+      G  L 
Sbjct: 577 QASMIHVRDQDFKALTR----DAFGEAFLTHTSTSPNQQLLASLDL-ARRQVDIEGFELV 631

Query: 422 REAVKTGIEARKLLMKKCKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHAF 481
           R      +  R   ++K + I  +   + E                R         W+  
Sbjct: 632 RHVYNMALVFRH-RVRKDRLISKWFRILDESDLVPDAFRSSTVSSYRQVRQGALADWN-- 688

Query: 482 EGYEHGQYFVDPCKFLLTTPGIDPETGEY------EHFGIPATILANFLRENNIIPEKCD 535
           E +   Q+ +DP +  L          ++      E FGI                 K  
Sbjct: 689 EAWRSDQFVLDPTRLTLFIGATGMNGYDFREKILMERFGIQI--------------NKTS 734

Query: 536 LNSILFLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQL 595
           +NS+L + T     + + +L+  + R    ++      +       A   R+    + ++
Sbjct: 735 INSVLLIFTIGVTWSSVHYLLDVLRRVAIDLDRS---QKAASGADLALHRRH----VEEI 787

Query: 596 CQEM--------HDLYVSHDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGQVELVPLRE 647
            Q++         DL    D      +M  A Y        +EA+  +V  Q+ L   R 
Sbjct: 788 TQDLPHLPDFSEFDLAFRPDDASSFGDMRSAFY-----AGYEEADREYV--QIGLAGRRL 840

Query: 648 VEGR--IAAEGALPYPPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPEL 698
            EG+  ++    +PYPPG   +VPG++    +  YFLA +  +  + G+ P+L
Sbjct: 841 AEGKTLVSTTFVVPYPPGFPVLVPGQLVSKEI-IYFLA-QLDVKEIHGYNPDL 891