Pairwise Alignments

Query, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., ornithine decarboxylase, inducible (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1286 bits (3329), Expect = 0.0
 Identities = 606/720 (84%), Positives = 666/720 (92%)

Query: 1   MNSLKIATSLSVRSCFTTQREVVDVLKTDFCDIGAAVVSVEDVQNGIIDKMNATGLKLPI 60
           M SLK+A SLSVRSCF   REVV+VL TDFCD+GAAVVSV+DV++GI++K+  TGLKLPI
Sbjct: 1   MKSLKVAASLSVRSCFDIDREVVNVLTTDFCDVGAAVVSVDDVKDGIVEKIKNTGLKLPI 60

Query: 61  FVAVCCEDQFPDDFCADITGVFELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVD 120
           FV+VCCE+ FPDD C+ ITGVFELC +  +FYGKQVETA+++Y+++LLPPFFGTLKKYV+
Sbjct: 61  FVSVCCEETFPDDICSSITGVFELCGSNTDFYGKQVETAIKKYEQALLPPFFGTLKKYVE 120

Query: 121 MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQ 180
           MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGET+FRSDMCNADV+LGDLLIHEGAP DAQ
Sbjct: 121 MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETIFRSDMCNADVKLGDLLIHEGAPLDAQ 180

Query: 181 AYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV 240
            YAAKV+NADKTYFVLNGTS+SNKV  NALL  GDLVLFDRNNHKSNHHGALIQAGATP+
Sbjct: 181 KYAAKVFNADKTYFVLNGTSSSNKVATNALLAKGDLVLFDRNNHKSNHHGALIQAGATPI 240

Query: 241 YLETARNPFGFIGGIDTHCFNESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNA 300
           YLETARNPFGFIGGID HCF E+YLR+ +R V P RA+ KRPFRLAIIQLGTYDGTIYNA
Sbjct: 241 YLETARNPFGFIGGIDAHCFKEAYLREQIREVAPERADEKRPFRLAIIQLGTYDGTIYNA 300

Query: 301 RQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGF 360
           RQVVDRIGHLCDYILFDSAWVGYEQFIPMM DCSPLLL+L PEDPGIIVTQSVHKQQAGF
Sbjct: 301 RQVVDRIGHLCDYILFDSAWVGYEQFIPMMNDCSPLLLELTPEDPGIIVTQSVHKQQAGF 360

Query: 361 SQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYL 420
           SQTSQIHKKD HIKGQ RYCNHKRFNNAFM+HASTS FYPLFAALDVNAKMHEG SGRYL
Sbjct: 361 SQTSQIHKKDKHIKGQARYCNHKRFNNAFMMHASTSHFYPLFAALDVNAKMHEGASGRYL 420

Query: 421 WREAVKTGIEARKLLMKKCKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHA 480
           WREAVK GIEARKLL+KKCKYIKPFIP MI+G+ WQ +PTEQ+ADDLRFFEFEPGQKWH+
Sbjct: 421 WREAVKAGIEARKLLLKKCKYIKPFIPSMIDGRQWQDYPTEQMADDLRFFEFEPGQKWHS 480

Query: 481 FEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSIL 540
           FEGYE GQYFVDPCKFLLTTPGID ETG+Y  FGIPATILANFLRENNIIPEKCDLNSIL
Sbjct: 481 FEGYEKGQYFVDPCKFLLTTPGIDAETGKYTEFGIPATILANFLRENNIIPEKCDLNSIL 540

Query: 541 FLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMH 600
           FL+TPAEDMAKMQHLV+QI+RFE+L++EDAPLSEVLPNVY AN+ RYK YTIRQLCQEMH
Sbjct: 541 FLMTPAEDMAKMQHLVSQISRFEKLVDEDAPLSEVLPNVYNANKARYKDYTIRQLCQEMH 600

Query: 601 DLYVSHDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPY 660
           +LYVSHDVKQLQKEMFR  +FP  VM+PQEANL F+RG VELVPL ++EGRIAAEGALPY
Sbjct: 601 NLYVSHDVKQLQKEMFRHAHFPTKVMDPQEANLEFIRGNVELVPLSQIEGRIAAEGALPY 660

Query: 661 PPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPELQGVYLEPTGEGRVQAMGYVLKR 720
           PPGVLC+VPGEIWGG+VQRYFLALEEGINLLPGF+PELQGVYLE T +G++QA+GYVL +
Sbjct: 661 PPGVLCMVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYLESTPDGKIQALGYVLNK 720