Pairwise Alignments

Query, 439 a.a., putrescine-ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., putrescine-ornithine antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  744 bits (1922), Expect = 0.0
 Identities = 370/439 (84%), Positives = 410/439 (93%)

Query: 1   MSKSNNKIGVVQLTILTIVNMMGSGIIMLPTQLAQVGTISILSWLVTAAGSTALAFAFAK 60
           MSKS NKIGVVQLTI+TIVNMMGSGIIMLPTQLAQVGTIS+LSWLVTAAGSTALAFAFAK
Sbjct: 1   MSKSENKIGVVQLTIITIVNMMGSGIIMLPTQLAQVGTISVLSWLVTAAGSTALAFAFAK 60

Query: 61  CGMFSKKSGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYADVLFGFHLTP 120
           CGMFSKKSGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYA VL   +L+P
Sbjct: 61  CGMFSKKSGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYAAVLLEVNLSP 120

Query: 121 IETCIATILVLWVATVANFGGARITGQVSSVTVWGIIIPVIGVSIIGWYWFDFDLYRAAW 180
           +  C+ATI VLW+ATVANFGGARITG+VSSVTVWGII+PVIGVS+IGW+WFD DLY+ AW
Sbjct: 121 MAICLATIGVLWLATVANFGGARITGRVSSVTVWGIILPVIGVSLIGWFWFDIDLYKGAW 180

Query: 181 NPHGLPFFQALGGSIAMTLWAFLGLESACANADAVENPEKNVPIAVMGGTLGAAVIYIIS 240
           NPH +PFF+ALGGSIAMTLWAFLGLESACAN++AV+NPEKNVPIAVMGGTLGAA+IYI+S
Sbjct: 181 NPHDMPFFKALGGSIAMTLWAFLGLESACANSEAVDNPEKNVPIAVMGGTLGAALIYIVS 240

Query: 241 TNVIAGIVPNADLANSNAPFGLAFAQMFNPTMGAIVMACAIVSCTGSLLGWQFTIAQVFK 300
           TNVIAGIVPNA+LA+SNAPFGLAFAQMFNP +G IVMACAI+SCTGSLLGWQFTIAQVFK
Sbjct: 241 TNVIAGIVPNAELASSNAPFGLAFAQMFNPVVGKIVMACAIISCTGSLLGWQFTIAQVFK 300

Query: 301 ASADEGFFPKLFSKVTKADAPVLGMLTIVSIQSVLSLMTISPSLNKQFEALVNLAVVTNI 360
           ASADEGFFPK+F+KV+KADAP+ GM  IVSIQ++LSLMTISPSL+KQFEALVNLAVVTNI
Sbjct: 301 ASADEGFFPKVFAKVSKADAPIWGMTIIVSIQTLLSLMTISPSLSKQFEALVNLAVVTNI 360

Query: 361 IPYILSMAALGVMQKQLNVPVSQAKVANVMAFIGAMYSFYALYSSGETAVMLGSIATFFG 420
           +PYILSMAALGVMQKQL VP ++A+VANV+A IGA+YSFYALYSSGETAVMLG+IATFFG
Sbjct: 361 VPYILSMAALGVMQKQLKVPANKARVANVIAVIGALYSFYALYSSGETAVMLGAIATFFG 420

Query: 421 WVLYGAIYRSQQNTPLKHA 439
           W +YG I     +  +K A
Sbjct: 421 WTIYGVISNKTPSVEIKAA 439