Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  162 bits (411), Expect = 7e-45
 Identities = 105/298 (35%), Positives = 159/298 (53%), Gaps = 8/298 (2%)

Query: 6   LNLADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDA 65
           L L  I  F L A+ G+FT AA+  GV+ + VSR + +LE  +G  L +RTTRS+ LT+A
Sbjct: 8   LQLGSIELFCLAAEAGSFTAAAQLAGVTPAAVSRSIFRLEERLGSRLFVRTTRSIRLTEA 67

Query: 66  GELFYRQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPD 125
           G+ ++ QC QAL+ + +A    +       G+LRI S+    G   I  +  AF    P 
Sbjct: 68  GKTYFEQCRQALTQLVEAQQEMMGAQSVPSGQLRI-SLPTTYGHHRILPLLPAFRALYPQ 126

Query: 126 VRIHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQH 185
           V + L  S+  +D + EG+D+A R+    D+S +AR L +  ++ +ASP Y    G PQ 
Sbjct: 127 VSVDLHLSNRNIDFVAEGYDLAIRVRAQPDSSMIARLLEDANLAVVASPDYLRKAGTPQT 186

Query: 186 PKQLADHRC----LTGSVKRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHN--GI 239
            + L DH C    L  S +R S+  K   +  +V   G+  C +  VL    LA +  G+
Sbjct: 187 LEDLDDHECIQFELPSSGRRISWLFKVDGKEKEVFGQGNYCCSDD-VLGGVTLAKHGAGL 245

Query: 240 IRVPTFYCHQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEFSKRYFEQ 297
            +   F   QELA G+LVEV   +   S  F+L+Y   +Y P R++ F++F  +Y EQ
Sbjct: 246 FQTYKFIVKQELANGQLVEVLAPFAGRSRPFTLLYPHGRYVPQRVRAFVDFLLQYREQ 303