Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family, in formaldehyde detoxification operon from Pseudomonas fluorescens FW300-N2E2

 Score =  169 bits (427), Expect = 9e-47
 Identities = 90/282 (31%), Positives = 158/282 (56%), Gaps = 3/282 (1%)

Query: 11  IRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGELFY 70
           I  FV +A+   FT AAE LGVS SH+SRQ+ +LE  +   L+ R+TR ++LT+AG+ F 
Sbjct: 9   IDEFVAVAECSQFTAAAERLGVSSSHISRQIVRLEERLQTRLLYRSTRRVTLTEAGQTFL 68

Query: 71  RQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVRIHL 130
           + C++     E+A+ A  D   E +G LR+     + GE  I  + + FM   P +R+ +
Sbjct: 69  QHCQRLQDGREEALRAVGDLASEPKGMLRMTCAVAY-GERFIVPLVTRFMGLYPQLRVDI 127

Query: 131 DFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPKQLA 190
           + S+  +DL+ E  D+A R+G+L+D+  VA +L   RM   ASP+Y    G+P    +L+
Sbjct: 128 ELSNRPLDLVHESLDLAIRLGRLQDSRLVATRLAPRRMYLCASPSYLERYGRPHSLSELS 187

Query: 191 DHRCLTGSVKRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFYCHQE 250
            H CL GS   W  Q ++  +     V G+ +C +G+ ++ AAL   G+ ++P +Y  + 
Sbjct: 188 RHNCLIGSSDIW--QLEQNGREFSQRVQGNWRCNSGQAVLDAALQGVGLCQLPDYYVLEH 245

Query: 251 LARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEFSK 292
           L  G L+ + +    P+     +Y + ++   ++++ +++ K
Sbjct: 246 LHSGALISLLEAHQPPNTAVWALYPQQRHLSPKVRKLVDYLK 287