Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  153 bits (387), Expect = 4e-42
 Identities = 98/293 (33%), Positives = 155/293 (52%), Gaps = 16/293 (5%)

Query: 8   LADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGE 67
           LAD+ AFV + + G  +  A  LG + S +SR +S+LE  +GV L+ RTTR L+LTDAG 
Sbjct: 8   LADVEAFVTVVEKGTLSAGAVALGTTPSVLSRAISRLEARLGVQLLRRTTRRLNLTDAGT 67

Query: 68  LFYRQCEQALSSIEQAV--LAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPD 125
           L+  Q   A + I+ A   +   D V   R  L + +  GH     +  + S F +  P 
Sbjct: 68  LYLEQSRSAFALIDDAERRIQGQDGVLTGRVRLSVPTTYGHYR---LPSLLSRFAEAYPQ 124

Query: 126 VRIHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQH 185
           VR+ L  ++  VDL+ EG+D+A R+G L D+  V RKL + R+  +A+P Y    G P+H
Sbjct: 125 VRVELSITNRNVDLVAEGYDLAIRLGPLPDSGLVGRKLEDARLCLVAAPHYLERAGTPRH 184

Query: 186 PKQLADHRCL------TGSVKRWSYQ-HKETKQTLDVPVDGDLQCKNGRV-LVRAALAHN 237
             +LA H CL      +G +  W ++ + E ++ L     G++Q  +  + +V  A A  
Sbjct: 185 VDELAAHACLPFVMPSSGRIAPWLFRDNHEDREWLPA---GNVQVSDDVLGIVSLAQAGM 241

Query: 238 GIIRVPTFYCHQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEF 290
           GI +   F   + + RGEL+ + +D+   S  FS+IY   +  P   +  I+F
Sbjct: 242 GICQTYEFIVRERIERGELMALLEDFGGRSRPFSIIYPPHRQLPAAARALIDF 294