Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  150 bits (380), Expect = 3e-41
 Identities = 96/293 (32%), Positives = 154/293 (52%), Gaps = 9/293 (3%)

Query: 3   LNQLNLADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSL 62
           + +  L ++ A V +A   NF +AA ELG+S S +S  ++ LE+ MGV L  RTTRS+SL
Sbjct: 1   MQKTGLLELNAVVALAHHRNFRRAAAELGLSPSAMSHAIAMLEHRMGVRLFNRTTRSVSL 60

Query: 63  TDAGELFYRQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQE 122
           ++AGE F  +   AL+ I  A+ +A        G LRIN+  G I + ++  +   F++ 
Sbjct: 61  SEAGEQFLARVRPALADISSAMESANQFRDTPSGNLRINASEGAI-QMIMTPVIVEFLRR 119

Query: 123 NPDVRIHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLT-EIRMSTLASPAYFTLCG 181
            PD+R+ +  S+  VD++ EGFD   RM +      +A   +  +R + + SP YFT   
Sbjct: 120 YPDMRLEIVTSTALVDIVAEGFDAGIRMAESVPLDMIAVPCSPPLRFAVVGSPVYFTRRP 179

Query: 182 QPQHPKQLADHRCL-----TGSVKRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAH 236
            P+ P  LA H C+     +G++ RW +  +  +Q +D  V+G L   +  ++V AAL  
Sbjct: 180 MPKTPGDLARHNCIRTRFASGTLYRWEFTKRGQQQVID--VEGTLTLDSPHLIVDAALQG 237

Query: 237 NGIIRVPTFYCHQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIE 289
            GII V      + L  G LV   +DW        + Y  +++ P  L+ FI+
Sbjct: 238 IGIICVNESSIAEHLNAGRLVRTLEDWTPAYPGLCVFYPSNRHMPAGLRAFID 290