Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  157 bits (398), Expect = 2e-43
 Identities = 97/288 (33%), Positives = 152/288 (52%), Gaps = 9/288 (3%)

Query: 8   LADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGE 67
           L  + AFV+ A+ G++ +AAE LG+S   V++ ++ LE+ +G  L+ RTTR  SLT+ G 
Sbjct: 4   LTSMSAFVMAAESGSYARAAERLGMSPQMVAKHVAALEHRLGARLLNRTTRRQSLTELGS 63

Query: 68  LFYRQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVR 127
            +Y +C+  +S  + A   A       RG+L+I S     G   +    + F++++P+V 
Sbjct: 64  AYYERCKHIVSEAQAADSLAQIMNDTPRGKLKI-SAPVTFGSYSLMPFMTDFLRQHPEVE 122

Query: 128 IHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPK 187
           I L  +   VDL+EEG++VAFR+G L ++S  AR L   R+   A+P+Y    G PQ P 
Sbjct: 123 IDLHLTDRFVDLVEEGYEVAFRIGPLANSSLTARPLAPYRLVACAAPSYLMERGTPQTPA 182

Query: 188 QLADHRCLTGSVKRWS------YQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIR 241
            L +H CL      WS      +Q  +      V V   LQ    + L+ AAL   GI+ 
Sbjct: 183 DLENHECL--GYAYWSRPADREWQFCKGSTVHKVQVTSRLQVNESKALLSAALDGFGIVL 240

Query: 242 VPTFYCHQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIE 289
            P  +    L  GELV +  D+  PS    L+Y  ++ +  +L+RFI+
Sbjct: 241 GPEDFLQPALQSGELVRLLTDFEAPSRHMHLLYTANRQRTAKLRRFID 288