Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  149 bits (375), Expect = 1e-40
 Identities = 90/287 (31%), Positives = 153/287 (53%), Gaps = 3/287 (1%)

Query: 6   LNLADIRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDA 65
           ++L  ++ F  + + G+FT AA  LG++++ VSR++++LE + GV L+ RTTR+L LT+A
Sbjct: 1   MDLNRVQIFAAVVEHGSFTAAATALGITKATVSRKVAELEENAGVQLLFRTTRALKLTEA 60

Query: 66  GELFYRQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPD 125
           G  +Y +  + LS ++QA        Q  RG+L+I      +G+  +  I + F+++ PD
Sbjct: 61  GSNYYHRVSRVLSELQQAETQLSASQQNIRGKLKI-VCPIELGQLFLGSILARFLKQYPD 119

Query: 126 VRIHLDFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQH 185
           ++I+ + ++ RVD+IEE  D+ F++ + +D       + +     LASP Y    G P+ 
Sbjct: 120 IQINTELTNRRVDVIEEDIDMLFQIAEPKDPRLTCHAMVKADKMLLASPEYLAQFGTPKT 179

Query: 186 PKQLADHRC--LTGSVKRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVP 243
           P  LA HR   L  +     ++  + KQ         L   N  +   AA+   GI  VP
Sbjct: 180 PADLAHHRAIRLVSAHIDGVWKIFDGKQWQVYEPVAQLTVNNVTLAREAAIEGLGIATVP 239

Query: 244 TFYCHQELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEF 290
           T    + LA G+LV V +D+ +   + +L Y +  Y P R + FI F
Sbjct: 240 TLIASEALASGKLVPVLEDYPMHQAKITLSYPQSAYLPRRYRVFIAF 286