Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., LysR, substrate-binding (RefSeq) from Shewanella amazonensis SB2B

 Score =  175 bits (443), Expect = 1e-48
 Identities = 95/253 (37%), Positives = 151/253 (59%), Gaps = 3/253 (1%)

Query: 14  FVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGELFYRQC 73
           FV +A+  +FT AA  LG+S + VSRQ+ +LE  +G  L+ RTTR +SLT+ G+LFYR C
Sbjct: 9   FVAVAEAQSFTAAAGRLGISTAQVSRQVRELEERLGSKLLYRTTRKVSLTEDGQLFYRHC 68

Query: 74  EQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVRIHLDFS 133
            Q L  +++A  A      E RG +R+ +   + GE+ +  I  A+MQ+ P V +  + +
Sbjct: 69  RQVLDGLDEAERAVSSLKSEPRGLIRMTAPVTY-GEQYVMPIVLAYMQQFPQVEVQCELT 127

Query: 134 SHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPKQLADHR 193
           + ++DL++ GFD+A R+G L D+S +ARKL E     +ASP Y +  G P    +L+ H+
Sbjct: 128 NQQLDLVQGGFDLAIRLGVLPDSSMMARKLAERVQYLVASPDYVSRHGAPHSLSELSRHQ 187

Query: 194 CLTGSVKRWSYQHKETKQTLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFYCHQELAR 253
           CL GS+  W +Q +   ++L   V G L C +G  L+ AALA  GI ++P +Y  + +  
Sbjct: 188 CLLGSLPFWRFQEEGKLRSL--KVKGRLSCSSGNTLLAAALAGMGIAQLPGYYVDEAIRD 245

Query: 254 GELVEVFQDWHIP 266
           G L+ + + +  P
Sbjct: 246 GRLLVLLKPFQEP 258