Pairwise Alignments

Query, 301 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  149 bits (377), Expect = 6e-41
 Identities = 93/282 (32%), Positives = 151/282 (53%), Gaps = 8/282 (2%)

Query: 11  IRAFVLIAKLGNFTKAAEELGVSRSHVSRQLSQLENSMGVTLVIRTTRSLSLTDAGELFY 70
           I  FV +   G F++ A+ELG+  + VSR++++LE+ +   L++R+TR L LT+ G   +
Sbjct: 12  IHLFVHLVNTGGFSQVAKELGMPVATVSRKVTKLESLLDTQLIMRSTRKLRLTEEGSELF 71

Query: 71  RQCEQALSSIEQAVLAAVDDVQEARGELRINSVGGHIGEELIADICSAFMQENPDVRIHL 130
            + +  ++  ++    +   V++A G LRI +    I    I  + + F +  PD+++H+
Sbjct: 72  GRYQNVVAQFDRC---SEPRVEKAEGTLRIAAPVSIISMIFIG-VLNDFSKAYPDIQLHI 127

Query: 131 DFSSHRVDLIEEGFDVAFRMGKLEDASFVARKLTEIRMSTLASPAYFTLCGQPQHPKQLA 190
             ++  +DLI+EG DVA   G   D+S+V++ L  +     ASP Y    G PQHP QL 
Sbjct: 128 TQNNSSIDLIDEGVDVAIVGGAQPDSSWVSKSLGVLDYGLFASPGYLACAGTPQHPDQLV 187

Query: 191 DHRCL-TGSVKRWSYQHKETKQ-TLDVPVDGDLQCKNGRVLVRAALAHNGIIRVPTFYCH 248
           +H  +    +  WS +H   +    + P    L   NG   VRA +   GI+  P  +  
Sbjct: 188 EHSLIKVWPLFNWSMKHVSGEDFYYEGPAKLTLGDLNG--AVRATVDDGGILYGPELFVK 245

Query: 249 QELARGELVEVFQDWHIPSVEFSLIYHKDKYQPVRLKRFIEF 290
            ELA GEL  V  DWH      SL+YH+  +QP+++K FIEF
Sbjct: 246 GELASGELRRVLPDWHGEQRRISLLYHQRTHQPLKVKLFIEF 287